RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 BMP4P12644 408 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 PPOXP50336 477 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 APOFQ13790 326 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 RCN1Q15293 331 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 MBNL2Q5VZF2 373 aaKnown RBP15.84■□□□□ 0.13
HDAC6-205ENST00000423941 RGS7BPQ6MZT1 257 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-205ENST00000423941 ARL9Q6T311 187 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 DNM1P46Q6ZS02 220 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 RFPL4BQ6ZWI9 263 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 SHFQ7M4L6 423 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 DPY19L4Q7Z388 723 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 DCXRQ7Z4W1 244 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 LRP11Q86VZ4 500 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 OR8J1Q8NGP2 316 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 TRUB1Q8WWH5 349 aaKnown RBP15.84■□□□□ 0.13
HDAC6-205ENST00000423941 OTULINQ96BN8 352 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 ZMYND19Q96E35 227 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-205ENST00000423941 PITX2Q99697 317 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 ATF6BQ99941 703 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 TOR3AQ9H497 397 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 HAO2Q9NYQ3 351 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 PMF1-BGLAPU3KQ54 211 aa15.84■□□□□ 0.13
HDAC6-205ENST00000423941 ERICH4A6NGS2 130 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 M0R129 80 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 ACSM4P0C7M7 580 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 PPP1CBP62140 327 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 SNRPD2P62316 118 aaKnown RBP15.83■□□□□ 0.12
HDAC6-205ENST00000423941 GGTLC2Q14390 218 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 KLHL12Q53G59 568 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 TMEM255AQ5JRV8 349 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 SLC25A30Q5SVS4 291 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 MEPCEQ7L2J0 689 aaKnown RBP15.83■□□□□ 0.12
HDAC6-205ENST00000423941 BCDIN3DQ7Z5W3 292 aaKnown RBP15.83■□□□□ 0.12
HDAC6-205ENST00000423941 OTOSQ8NHW6 89 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 PERPQ96FX8 193 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 RDH12Q96NR8 316 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 IL4I1Q96RQ9 567 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 ABHD6Q9BV23 337 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 C1QTNF5Q9BXJ0 243 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 DCLRE1BQ9H816 532 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 MYEF2Q9P2K5 600 aaKnown RBP15.83■□□□□ 0.12
HDAC6-205ENST00000423941 STARD10Q9Y365 291 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 ORC6Q9Y5N6 252 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 ITPR3Q14573 2671 aa15.83■□□□□ 0.12
HDAC6-205ENST00000423941 ABHD16AO95870 558 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 CLPTM1O96005 669 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 IGHV4-39P01824 125 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 LCKP06239 509 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 SPARCP09486 303 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 RGS6P49758 472 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 ATP5J2P56134 94 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 ZNF718Q3SXZ3 478 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 ZIK1Q3SY52 487 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-205ENST00000423941 ERI1Q8IV48 349 aaKnown RBP15.82■□□□□ 0.12
HDAC6-205ENST00000423941 OR6N2Q8NGY6 317 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 SYNPRQ8TBG9 265 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 SLC25A40Q8TBP6 338 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 KLF14Q8TD94 323 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-205ENST00000423941 RNF133Q8WVZ7 376 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 UBE2FQ969M7 185 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 SLAMF6Q96DU3 332 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 OR2J1Q9GZK6 312 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 YIPF3Q9GZM5 350 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 OR51B6Q9H340 312 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 C8orf4Q9NR00 106 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 GRIP1Q9Y3R0 1128 aa15.82■□□□□ 0.12
HDAC6-205ENST00000423941 SLC16A6O15403 523 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 SELENOFO60613 162 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 ALOX5APP20292 161 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 NUDT6P53370 316 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 KLF3P57682 345 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-205ENST00000423941 SNRPGP62308 76 aaKnown RBP15.81■□□□□ 0.12
HDAC6-205ENST00000423941 TMEM154Q6P9G4 183 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 SLC16A9Q7RTY1 509 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 NAA40Q86UY6 237 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 PACRGLQ8N7B6 248 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 ZNF454Q8N9F8 522 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 ABHD4Q8TB40 342 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 COG8Q96MW5 612 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 AMELYQ99218 206 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 SYT3Q9BQG1 590 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 FAM118AQ9NWS6 357 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 FZR1Q9UM11 496 aa15.81■□□□□ 0.12
HDAC6-205ENST00000423941 SLC22A31A6NKX4 558 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 ZNF878C9JN71 531 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 F12P00748 615 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-205ENST00000423941 GABRB1P18505 474 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 MPV17P39210 176 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 CDC42P60953 191 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 TMED1Q13445 227 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 EIF2B1Q14232 305 aaKnown RBP15.8■□□□□ 0.12
HDAC6-205ENST00000423941 OGFRL1Q5TC84 451 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-205ENST00000423941 FBXW12Q6X9E4 464 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 GID4Q8IVV7 300 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 APOBEC3DQ96AK3 386 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-205ENST00000423941 HAVCR1Q96D42 359 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 SORCS2Q96PQ0 1159 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 KCNJ15Q99712 375 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 MS4A5Q9H3V2 200 aa15.8■□□□□ 0.12
HDAC6-205ENST00000423941 POFUT1Q9H488 388 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms