RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 A0A1W2PPL8 197 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 MLNRO43193 412 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 SGCEO43556 437 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 DOK2O60496 412 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 IGHV1-69P01742 117 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 OPN1MWP04001 364 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 OPN1MW2P0DN77 364 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 OPN1MW3P0DN78 364 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 GATA4P43694 442 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 OR2T2Q6IF00 324 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 ANKRD42Q8N9B4 389 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 LRRC8CQ8TDW0 803 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 TAMM41Q96BW9 452 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 ZNF582Q96NG8 517 aaPredicted RBP13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 WDFY2Q96P53 400 aa13.86□□□□□ -0.19
CHCHD3-202ENST00000423635 TOP3AQ13472 1001 aaPredicted RBP13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 LRRC75AQ8NAA5 344 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 Q8TCH9 128 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 RASSF5Q8WWW0 418 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 ERGIC1Q969X5 290 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 RASD2Q96D21 266 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 POLR2J2Q9GZM3 115 aaKnown RBP13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 SIRPDQ9H106 197 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 POLR2J3Q9H1A7 115 aaKnown RBP13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 DPAGT1Q9H3H5 408 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 EMC7Q9NPA0 242 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 USH1CQ9Y6N9 552 aa13.85□□□□□ -0.19
CHCHD3-202ENST00000423635 DNAH3Q8TD57 4116 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 PLXNB1O43157 2135 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 A0A0U1RQK1 487 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 F5H5P2 479 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 PIP5K1CO60331 668 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 PRB2P02812 416 aaPredicted RBP13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 RGS6P49758 472 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 CRYBA2P53672 197 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 FAM189A2Q15884 450 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 CYP51A1Q16850 503 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 C1orf94Q6P1W5 598 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 CELF2-AS1Q8N7Q2 184 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 PNLDC1Q8NA58 520 aaKnown RBP13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 OR5L1Q8NGL2 311 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 SLC26A7Q8TE54 656 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 LRTOMTQ8WZ04 291 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 SLC7A6Q92536 515 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 ERVK-18Q9QC07 812 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 RIMS3Q9UJD0 308 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 MED31Q9Y3C7 131 aa13.84□□□□□ -0.19
CHCHD3-202ENST00000423635 IGHV3-64DA0A0J9YX35 117 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 ZNF816-ZNF321PA0A0X1KG74 233 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 HTR3EA5X5Y0 456 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 OR6C6A6NF89 314 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 A6NIZ1 184 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 IQCF6A8MYZ5 107 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 OR5F1O95221 314 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 IRF2P14316 349 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 FUT4P22083 530 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 TAS2R41P59536 307 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 CTXN1P60606 82 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 RAP1BP61224 184 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 RAP1AP62834 184 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 MAB21L1Q13394 359 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 METTL11BQ5VVY1 283 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 LHX4Q969G2 390 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 PPP1R14AQ96A00 147 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 CENPHQ9H3R5 247 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 TMEM100Q9NV29 134 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 PTTG3PQ9NZH4 202 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 CTSZQ9UBR2 303 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 TMCC3Q9ULS5 477 aa13.83□□□□□ -0.2
CHCHD3-202ENST00000423635 TET2Q6N021 2002 aaPredicted RBP13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 TMEM120BA0PK00 339 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 GPR37O15354 613 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 SLC18A1P54219 525 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 LOXL3P58215 753 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 COX10Q12887 443 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 AQP6Q13520 282 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 PIN1Q13526 163 aaPredicted RBP13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 SELPLGQ14242 412 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 CLEC12AQ5QGZ9 265 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 INTS11Q5TA45 600 aaKnown RBP13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 DHRS7BQ6IAN0 325 aaPredicted RBP13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 WDR93Q6P2C0 686 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 CCDC80Q76M96 950 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 OR1F12Q8NHA8 337 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 TECTBQ96PL2 329 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 KAT8Q9H7Z6 458 aaKnown RBP13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 ATPIF1Q9UII2 106 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 SH3GLB1Q9Y371 365 aa13.82□□□□□ -0.2
CHCHD3-202ENST00000423635 FBP2O00757 339 aa13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 POLR3GO15318 223 aaPredicted RBP13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 TGFBR2P37173 567 aa13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 RAD23AP54725 363 aa13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 EGR3Q06889 387 aa13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 FHL1Q13642 323 aa13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 KCNJ8Q15842 424 aa13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 CCDC92Q53HC0 331 aaPredicted RBP13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 IGFN1Q86VF2 1251 aa13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 GALNT4Q8N4A0 578 aa13.81□□□□□ -0.2
CHCHD3-202ENST00000423635 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms