RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TIMM8AO60220 97 aaPredicted RBP9.36□□□□□ -0.91
USP49-204ENST00000423567 TIPRLO75663 272 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 NGFP01138 241 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 HMGN1P05114 100 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 FCGR1AP12314 374 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 OSMP13725 252 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 GRK5P34947 590 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 ZNF81P51508 661 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 SLC25A1P53007 311 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 HIST1H3AP68431 136 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 CRMP1Q14194 572 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 HIST2H3PS2Q5TEC6 136 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 SHQ1Q6PI26 577 aaKnown RBP9.36□□□□□ -0.91
USP49-204ENST00000423567 CORO6Q6QEF8 472 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 HIST2H3AQ71DI3 136 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 TMEM179BQ7Z7N9 219 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 LINC00346Q8IVM7 164 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 IQCF1Q8N6M8 205 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 OR9Q1Q8NGQ5 310 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 OR6K6Q8NGW6 343 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 OR4Q3Q8NH05 313 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 RDH5Q92781 318 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 SLCO4A1Q96BD0 722 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 OTULINQ96BN8 352 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 PLEKHA8Q96JA3 519 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 RBM4Q9BWF3 364 aaKnown RBP9.36□□□□□ -0.91
USP49-204ENST00000423567 CMC2Q9NRP2 79 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 CYB5R1Q9UHQ9 305 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 AP4S1Q9Y587 144 aa9.36□□□□□ -0.91
USP49-204ENST00000423567 TVP23AA6NH52 213 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 VWC2LB2RUY7 222 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 TLX2O43763 284 aaPredicted RBP9.35□□□□□ -0.91
USP49-204ENST00000423567 CD5LO43866 347 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 SPI1P17947 270 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 ACHEP22303 614 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 PRKACGP22612 351 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 FASP25445 335 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 GIFP27352 417 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 GGT2P36268 569 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 MPV17P39210 176 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 CHN2P52757 468 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 CCL8P80075 99 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 MRPS11P82912 194 aaKnown RBP9.35□□□□□ -0.91
USP49-204ENST00000423567 GINS1Q14691 196 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 ATP6AP1Q15904 470 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 TMEM249Q2WGJ8 235 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 FAM209AQ5JX71 171 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 SLC18B1Q6NT16 456 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 HIPK1Q86Z02 1210 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 HS3ST5Q8IZT8 346 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 OR51L1Q8NGJ5 315 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 OR5K1Q8NHB7 308 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 SLC7A6Q92536 515 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 PTP4A1Q93096 173 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 SPTSSAQ969W0 71 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 APOBEC3DQ96AK3 386 aaPredicted RBP9.35□□□□□ -0.91
USP49-204ENST00000423567 DIRC2Q96SL1 478 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 DDOQ99489 341 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 ATF6BQ99941 703 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 BPESC1Q9GZL8 116 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 EGLN1Q9GZT9 426 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 CHODLQ9H9P2 273 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 YAE1D1Q9NRH1 226 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 PAPOLBQ9NRJ5 636 aaKnown RBP9.35□□□□□ -0.91
USP49-204ENST00000423567 MRPL22Q9NWU5 206 aaKnown RBP9.35□□□□□ -0.91
USP49-204ENST00000423567 NKIRAS2Q9NYR9 191 aa9.35□□□□□ -0.91
USP49-204ENST00000423567 PRR23D1E9PI22 279 aaPredicted RBP9.34□□□□□ -0.91
USP49-204ENST00000423567 F5H5K5 113 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 LYNX1G3V0Z9 82 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 EBAG9O00559 213 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 HPXP02790 462 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 GYPBP06028 91 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 DBHP09172 617 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 SPARCP09486 303 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 PRR23D2P0DMB1 279 aaPredicted RBP9.34□□□□□ -0.91
USP49-204ENST00000423567 LYNX1P0DP58 116 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 TNFSF4P23510 183 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 MAGEB1P43366 347 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 GPR6P46095 362 aaPredicted RBP9.34□□□□□ -0.91
USP49-204ENST00000423567 GZMKP49863 264 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 ENTPD1P49961 510 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 TPTEP56180 551 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 TMEM33P57088 247 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 DBPQ10586 325 aaPredicted RBP9.34□□□□□ -0.91
USP49-204ENST00000423567 TAF13Q15543 124 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 TSTQ16762 297 aaKnown RBP9.34□□□□□ -0.91
USP49-204ENST00000423567 ZNF362Q5T0B9 420 aaPredicted RBP9.34□□□□□ -0.91
USP49-204ENST00000423567 LCE2CQ5TA81 110 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 CYB5R2Q6BCY4 276 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 CFAP77Q6ZQR2 320 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 UTP4Q969X6 686 aaKnown RBP9.34□□□□□ -0.91
USP49-204ENST00000423567 CMBLQ96DG6 245 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 PRRG3Q9BZD7 231 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 NMNAT2Q9BZQ4 307 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 SAP30LQ9HAJ7 183 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 ENOPH1Q9UHY7 261 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 ZDHHC8Q9ULC8 765 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 STARD10Q9Y365 291 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 COMMD3-BMI1R4GMX3 469 aa9.34□□□□□ -0.91
USP49-204ENST00000423567 ARFGEF3Q5TH69 2177 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms