RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TMEM163Q8TC26 289 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 SPTSSAQ969W0 71 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 MAP6Q96JE9 813 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 DCLRE1CQ96SD1 692 aaKnown RBP13.55□□□□□ -0.24
BRAT1-202ENST00000421712 DOK1Q99704 481 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 COPS4Q9BT78 406 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 TOR3AQ9H497 397 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 GPR160Q9UJ42 338 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 FBXO9Q9UK97 447 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-202ENST00000421712 TEX15Q9BXT5 2789 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 TMEM129A0AVI4 362 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 SELENOFO60613 162 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 NDUFS7O75251 213 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 CLPTM1O96005 669 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 ERCC1P07992 297 aaPredicted RBP13.54□□□□□ -0.24
BRAT1-202ENST00000421712 ADRA2AP08913 450 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 PAX1P15863 534 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 SLC2A5P22732 501 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 EVX1P49640 407 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 TPTEP56180 551 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 KLF3P57682 345 aaPredicted RBP13.54□□□□□ -0.24
BRAT1-202ENST00000421712 ELF3P78545 371 aaPredicted RBP13.54□□□□□ -0.24
BRAT1-202ENST00000421712 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 MSMPQ1L6U9 139 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 RFPL4BQ6ZWI9 263 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 C1orf174Q8IYL3 243 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 FAM81AQ8TBF8 368 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 THEM6Q8WUY1 208 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 SLAMF6Q96DU3 332 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 TEAD3Q99594 435 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 OR2J1Q9GZK6 312 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 CXXC4Q9H2H0 198 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 TBCCD1Q9NVR7 557 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 TAAR3PQ9P1P4 343 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 ATPIF1Q9UII2 106 aa13.54□□□□□ -0.24
BRAT1-202ENST00000421712 CSMD1Q96PZ7 3565 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 H0YHG0 523 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 H7C417 338 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 M0R233 179 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 SSX4O60224 188 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 MRPL3P09001 348 aaKnown RBP13.53□□□□□ -0.24
BRAT1-202ENST00000421712 PSKH1P11801 424 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 ALDH3B1P43353 468 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 SLC6A9P48067 706 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 RGS6P49758 472 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 NUDT6P53370 316 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 MOGQ16653 247 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 LPCAT4Q643R3 524 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 MEPCEQ7L2J0 689 aaKnown RBP13.53□□□□□ -0.24
BRAT1-202ENST00000421712 TIGD4Q8IY51 512 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 OR5L1Q8NGL2 311 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 SNX33Q8WV41 574 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 IPCEF1Q8WWN9 437 aaPredicted RBP13.53□□□□□ -0.24
BRAT1-202ENST00000421712 COG8Q96MW5 612 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 RAB1BQ9H0U4 201 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 BARX1Q9HBU1 254 aaPredicted RBP13.53□□□□□ -0.24
BRAT1-202ENST00000421712 PNRC2Q9NPJ4 139 aaKnown RBP13.53□□□□□ -0.24
BRAT1-202ENST00000421712 SLCO1C1Q9NYB5 712 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 MYEF2Q9P2K5 600 aaKnown RBP13.53□□□□□ -0.24
BRAT1-202ENST00000421712 STARD10Q9Y365 291 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 GMPPBQ9Y5P6 360 aa13.53□□□□□ -0.24
BRAT1-202ENST00000421712 ARFGEF3Q5TH69 2177 aa13.52□□□□□ -0.24
BRAT1-202ENST00000421712 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.24
BRAT1-202ENST00000421712 CCDC182A6NF36 153 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 SLC22A31A6NKX4 558 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF878C9JN71 531 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 IGHV4-39P01824 125 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 MT-ND5P03915 603 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 LCATP04180 440 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 ZNF250P15622 560 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 HSD11B1P28845 292 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 SLC15A1P46059 708 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 PPOXP50336 477 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 EFNB1P98172 346 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 MAD2L1BPQ15013 274 aaPredicted RBP13.52□□□□□ -0.25
BRAT1-202ENST00000421712 TESK1Q15569 626 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 PCK2Q16822 640 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 NXNL2Q5VZ03 156 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 SLC16A9Q7RTY1 509 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.52□□□□□ -0.25
BRAT1-202ENST00000421712 GID4Q8IVV7 300 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 ZCCHC24Q8N2G6 241 aaKnown RBP13.52□□□□□ -0.25
BRAT1-202ENST00000421712 OR10S1Q8NGN2 331 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 OR8J1Q8NGP2 316 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 KLF14Q8TD94 323 aaPredicted RBP13.52□□□□□ -0.25
BRAT1-202ENST00000421712 APOBEC3DQ96AK3 386 aaPredicted RBP13.52□□□□□ -0.25
BRAT1-202ENST00000421712 MARS2Q96GW9 593 aaKnown RBP13.52□□□□□ -0.25
BRAT1-202ENST00000421712 HRASLS5Q96KN8 279 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 ABHD6Q9BV23 337 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 TPK1Q9H3S4 243 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 DCLRE1BQ9H816 532 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 MARCH7Q9H992 704 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 PTTG3PQ9NZH4 202 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 LAMP5Q9UJQ1 280 aa13.52□□□□□ -0.25
BRAT1-202ENST00000421712 M0R135 149 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 LYNP07948 512 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 H2BFMP0C1H6 154 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 ACSM4P0C7M7 580 aa13.51□□□□□ -0.25
BRAT1-202ENST00000421712 NAT2P11245 290 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms