RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 IFNA6P05013 189 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 IL11P20809 199 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 SNTB1Q13884 538 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 OR7A5Q15622 319 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 ZNF248Q8NDW4 579 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 RLN3Q8WXF3 142 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 TSNAXQ99598 290 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 NKX6-2Q9C056 277 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 ZNF576Q9H609 170 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 MBD2Q9UBB5 411 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 OR2F2O95006 317 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 ROM1Q03395 351 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 OR2F1Q13607 317 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 VWA2Q5GFL6 755 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 RAB12Q6IQ22 244 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 OR1S2Q8NGQ3 325 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 WNT2BQ93097 391 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 MARC2Q969Z3 335 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 SPACA5Q96QH8 159 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 SLCO5A1Q9H2Y9 848 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 PDE7BQ9NP56 450 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 MED12Q93074 2177 aa13.59□□□□□ -0.23
SEMA3B-203ENST00000419007 MEGF11A6BM72 1044 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 RNF222A6NCQ9 220 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 FRG2CA6NGY1 282 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 FADS1O60427 444 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 EIF4E2O60573 245 aaKnown RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 STK17BO94768 372 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 CD8AP01732 235 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 HRH1P35367 487 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 CAPZBP47756 277 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 ARRB1P49407 418 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 NSDHLQ15738 373 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 SMAD2Q15796 467 aaKnown RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 ACOT7LQ6ZUV0 252 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 ZNF519Q8TB69 540 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 KLHDC7BQ96G42 594 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 PHB2Q99623 299 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 NPAS1Q99742 590 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 PRRT1Q99946 306 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 CNTD2Q9H8S5 307 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 PCDHB10Q9UN67 800 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 PCDH15Q96QU1 1955 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 CABIN1Q9Y6J0 2220 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 ERCC1P07992 297 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 GNB3P16520 340 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 FOXL2P58012 376 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 DLX2Q07687 328 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 SHISA6Q6ZSJ9 500 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 LYG2Q86SG7 212 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 CLRN3Q8NCR9 226 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 GAREM1Q9H706 876 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 GDF2Q9UK05 429 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 R4GMQ9 66 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 NUP210LQ5VU65 1888 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 A0A1B0GTI1 187 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 GPR31O00270 319 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 H2BFMP0C1H6 154 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 CD96P40200 585 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 PDSS1Q5T2R2 415 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 MOB3CQ70IA8 216 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 COMMD2Q86X83 199 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 ARMC10Q8N2F6 343 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 ADAD2Q8NCV1 583 aaKnown RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 LMX1AQ8TE12 382 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 ADAT1Q9BUB4 502 aaKnown RBP13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 SELENOIQ9C0D9 397 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 LANCL2Q9NS86 450 aa13.58□□□□□ -0.24
SEMA3B-203ENST00000419007 H0YIG0 161 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 PMP2P02689 132 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 IGFBP3P17936 291 aaPredicted RBP13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 BDKRB2P30411 391 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 CASRP41180 1078 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 AKR1D1P51857 326 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 PPIAP62937 165 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 MEF2DQ14814 521 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 PAN3Q58A45 887 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 C16orf47Q6ZP98 133 aaPredicted RBP13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 RTN4RL2Q86UN3 420 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 PAQR8Q8TEZ7 354 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 THAP3Q8WTV1 239 aaPredicted RBP13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 ASB13Q8WXK3 278 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 ADIPOR1Q96A54 375 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 MED29Q9NX70 200 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 C9orf170A2RU37 121 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 WDPCPO95876 746 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 MT-ATP6P00846 226 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 GP1BAP07359 652 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 CRABP1P29762 137 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 BLKP51451 505 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 POLR2HP52434 150 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 OR52N4Q8NGI2 321 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 EDAQ92838 391 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 SLC6A15Q9H2J7 730 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 CUTCQ9NTM9 273 aa13.57□□□□□ -0.24
SEMA3B-203ENST00000419007 A8MVM7 634 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 NPIPA5E9PKD4 350 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 PLPP3O14495 311 aa13.56□□□□□ -0.24
SEMA3B-203ENST00000419007 DDAH2O95865 285 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms