RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 OR2A2Q6IF42 318 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 TSEN54Q7Z6J9 526 aaKnown RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 TMEM200AQ86VY9 491 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ZDHHC23Q8IYP9 409 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 DEFB124Q8NES8 71 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 OR6M1Q8NGM8 313 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 TMEM230Q96A57 120 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 C20orf85Q9H1P6 137 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 SSSCA1O60232 199 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 PIAS2O75928 621 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 CAPZBP47756 277 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 NOVP48745 357 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 OR10A3P58181 314 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 NIPSNAP1Q9BPW8 284 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ZNF346Q9UL40 294 aaKnown RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ARID1AO14497 2285 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 CTXN2P0C2S0 81 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 HOXD12P35452 270 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 MTNR1BP49286 362 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 MNX1P50219 401 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 HCCSP53701 268 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 PPP2CBP62714 309 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 PPP2CAP67775 309 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 SPATA46Q5T0L3 261 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 KDM4DQ6B0I6 523 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ASTLQ6HA08 431 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ALKAL2Q6UX46 152 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 DND1Q8IYX4 353 aaKnown RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 I6L893 689 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ZNF701M0R085 212 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 WDR1O75083 606 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 GFERP55789 205 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 SPCS2Q15005 226 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 HMGN3Q15651 99 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 EMC4Q5J8M3 183 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 OR6K3Q8NGY3 331 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ZNF486Q96H40 463 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 OXGR1Q96P68 337 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 XRCC3O43542 346 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 SRP9P49458 86 aaKnown RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ZNF766Q5HY98 468 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 KLHDC8BQ8IXV7 354 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 OR10G3Q8NGC4 313 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 SFT2D1Q8WV19 159 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 COMMD5Q9GZQ3 224 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 ZNF195O14628 629 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 PPIHO43447 177 aaKnown RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 SDHAP31040 664 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 LGI3Q8N145 548 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 GABRG1Q8N1C3 465 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 OPALINQ96PE5 141 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 MKRN2Q9H000 416 aaKnown RBP10.22□□□□□ -0.77
PTCH1-205ENST00000418258 TNFRSF19Q9NS68 423 aa10.22□□□□□ -0.77
PTCH1-205ENST00000418258 CTDSP2O14595 271 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 HIST1H1CP16403 213 aaKnown RBP10.21□□□□□ -0.77
PTCH1-205ENST00000418258 PSMB1P20618 241 aaKnown RBP10.21□□□□□ -0.77
PTCH1-205ENST00000418258 OR5I1Q13606 314 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 SPANXN5Q5MJ07 72 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 ENTHD1Q8IYW4 607 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 TRGV5A0A0B4J1U4 118 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 PRKNO60260 465 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-205ENST00000418258 BMI1P35226 326 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 RPL7L1Q6DKI1 246 aaKnown RBP10.21□□□□□ -0.77
PTCH1-205ENST00000418258 OR2Z1Q8NG97 314 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 RDH5Q92781 318 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 MOB1AQ9H8S9 216 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 ZFC3H1O60293 1989 aaKnown RBP10.21□□□□□ -0.77
PTCH1-205ENST00000418258 CXCL13O43927 109 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 TAGLN2P37802 199 aaKnown RBP10.21□□□□□ -0.77
PTCH1-205ENST00000418258 OR8U1Q8NH10 309 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 LAT2Q9GZY6 243 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 GPR84Q9NQS5 396 aa10.21□□□□□ -0.77
PTCH1-205ENST00000418258 HAAOP46952 286 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.78
PTCH1-205ENST00000418258 FAM71E1Q6IPT2 247 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 C17orf107Q6ZR85 190 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 C17orf78Q8N4C9 275 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 OR11G2Q8NGC1 345 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 FCRL1Q96LA6 429 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 SOCS7O14512 581 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 DFFBO76075 338 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 LIN7CQ9NUP9 197 aaKnown RBP10.21□□□□□ -0.78
PTCH1-205ENST00000418258 PSORS1C1Q9UIG5 152 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 CCR6P51684 374 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 ZNF85Q03923 595 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 IKZF5Q9H5V7 419 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 PLXNB2O15031 1838 aa10.21□□□□□ -0.78
PTCH1-205ENST00000418258 AQP7P3A6NL99 342 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 CLDN24A6NM45 220 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 UBL3O95164 117 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 ACKR3P25106 362 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 SOHLH1Q5JUK2 328 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 SIAH3Q8IW03 269 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 C16orf52Q8NHV5 167 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 LTB4R2Q9NPC1 389 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 CNR1P21554 472 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 SMIM21Q3B7S5 101 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 SAXO2Q658L1 398 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 OR2G3Q8NGZ4 309 aa10.2□□□□□ -0.78
PTCH1-205ENST00000418258 ST8SIA1Q92185 356 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms