RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 C4orf45Q96LM5 186 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 PARPBPQ9NWS1 579 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 TTC28Q96AY4 2481 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 IGKV1D-43A0A0B4J1Z2 117 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 CCNOP22674 350 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 FZD2Q14332 565 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 SLC17A1Q14916 467 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 TMEM71Q6P5X7 295 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 Q7L0L9 218 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 BHLHE23Q8NDY6 225 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 OR5B2Q96R09 309 aa11.86□□□□□ -0.51
TNFRSF8-203ENST00000417814 PRSS44E7EML9 344 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 G3V3Q6 166 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 H7C417 338 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 XRCC3O43542 346 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 SERPINA2P20848 420 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 GABRR1P24046 479 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 PTBP1P26599 531 aaKnown RBP eCLIP11.85□□□□□ -0.512e-12■■■■■ 50.3
TNFRSF8-203ENST00000417814 HYAL1Q12794 435 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 AIMP2Q13155 320 aaKnown RBP11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 C9orf135Q5VTT2 229 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 GTPBP8Q8N3Z3 284 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 BPIFCQ8NFQ6 507 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 OR1S2Q8NGQ3 325 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 JAM3Q9BX67 310 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 MTFP1Q9UDX5 166 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 A0A0A6YYH2 397 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 A6NJ64 397 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 GIPP09681 153 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 GPR3P46089 330 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 EMP2P54851 167 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 GLO1Q04760 184 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 EBPQ15125 230 aaKnown RBP11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 FAM57BQ71RH2 274 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 PXT1Q8NFP0 134 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 PIGTQ969N2 578 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 DMDP11532 3685 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 LOC100289279A0A1B0GTE1 492 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 PLSCR5A0PG75 271 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 PRAF2O60831 178 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 CSF1P09603 554 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 ZNF806P0C7X5 589 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 SMIM10L1P0DMW3 83 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 GABRA1P14867 456 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 RPS4XP62701 263 aaKnown RBP11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 INSM1Q01101 510 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 TLE1Q04724 770 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 ZNF585AQ6P3V2 769 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 SEMA6DQ8NFY4 1073 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 LIN37Q96GY3 246 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 SMIM10Q96HG1 83 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 LCORQ96JN0 433 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 S100A13Q99584 98 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 SERTAD3Q9UJW9 196 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 OR52A1Q9UKL2 312 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 HHLA2Q9UM44 414 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 SPTA1P02549 2419 aa11.85□□□□□ -0.51
TNFRSF8-203ENST00000417814 TMEM200CA6NKL6 621 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 EFCAB7A8K855 629 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 SRPX2O60687 465 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 IGHV3-9P01782 118 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 FAM209BQ5JX69 171 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 C1orf140Q5VVS0 124 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 ZNF660Q6AZW8 331 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 NAA40Q86UY6 237 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 FBXL21Q9UKT6 434 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 B3GALT1Q9Y5Z6 326 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 KCNMB2Q9Y691 235 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 PRSS37A4D1T9 235 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 METTL21EPA6NDL7 271 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 TMEM212A6NML5 194 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 MPTX1A8MV57 137 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 KRBOX1C9JBD0 128 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 ZNF749O43361 778 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 STK17BO94768 372 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 KLK2P20151 261 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 SERPINF1P36955 418 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 CD96P40200 585 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 PAPD4Q6PIY7 484 aaKnown RBP11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 OTOSQ8NHW6 89 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 NUBPLQ8TB37 319 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 SCARB1Q8WTV0 552 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 PTPMT1Q8WUK0 201 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 CCDC107Q8WV48 283 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 ASH2LQ9UBL3 628 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 ZNF208O43345 1280 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 PATE4P0C8F1 98 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 PNMTP11086 282 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 GUCA1AP43080 201 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 SP6Q3SY56 376 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 ELSPBP1Q96BH3 223 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 SEH1LQ96EE3 360 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 METTL7AQ9H8H3 244 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 CNTD2Q9H8S5 307 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 CSAG2Q9Y5P2 127 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 TMEM14AQ9Y6G1 99 aa11.84□□□□□ -0.51
TNFRSF8-203ENST00000417814 RALGAPA1Q6GYQ0 2036 aa11.83□□□□□ -0.52
TNFRSF8-203ENST00000417814 D6RAR5 112 aa11.83□□□□□ -0.52
TNFRSF8-203ENST00000417814 PRAMEF26H0Y7S4 382 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms