RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 C1orf94Q6P1W5 598 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 CYP2R1Q6VVX0 501 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 ARHGAP24Q8N264 748 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 FITM2Q8N6M3 262 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 GJC3Q8NFK1 279 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 TSSK2Q96PF2 358 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 NPTNQ9Y639 398 aa21.43■■□□□ 1.02
VEGFA-208ENST00000417285 ISPDA4D126 451 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 IDH3BO43837 385 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 HIST1H1CP16403 213 aaKnown RBP21.42■■□□□ 1.02
VEGFA-208ENST00000417285 CCDC92Q53HC0 331 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-208ENST00000417285 USP43Q70EL4 1123 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 LINC00471Q8N535 108 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 OR2Z1Q8NG97 314 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 ST7LQ8TDW4 575 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 NSL1Q96IY1 281 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 NMNAT3Q96T66 252 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 MUC13Q9H3R2 512 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 SRA1Q9HD15 236 aaKnown RBP21.42■■□□□ 1.02
VEGFA-208ENST00000417285 TMEM106BQ9NUM4 274 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 IL19Q9UHD0 177 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 B9D1Q9UPM9 204 aa21.42■■□□□ 1.02
VEGFA-208ENST00000417285 IGLV1-36A0A0B4J1U3 117 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 DCTN6O00399 190 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 RER1O15258 196 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 SLC27A4Q6P1M0 643 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 PGBD2Q6P3X8 592 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 ZNF620Q6ZNG0 422 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 C1orf229Q6ZS94 237 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-208ENST00000417285 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-208ENST00000417285 OR4K13Q8NH42 304 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 NANPQ8TBE9 248 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 SLC7A6Q92536 515 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 TMPRSS13Q9BYE2 586 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 POFUT1Q9H488 388 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 UBAP1Q9NZ09 502 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 PCDHB10Q9UN67 800 aa21.41■■□□□ 1.02
VEGFA-208ENST00000417285 WNK2Q9Y3S1 2297 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 TENM1Q9UKZ4 2725 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 PPIAL4EA0A075B759 164 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 PPIAL4CA0A0B4J2A2 164 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 PPIAL4DF5H284 164 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 TNFRSF11BO00300 401 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 VENTXO95231 258 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 GPANK1O95872 356 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 AVPP01185 164 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 SBK2P0C263 348 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 PPIAL4FP0DN26 164 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 ATP6V1B2P21281 511 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 HMGA2P52926 109 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 HIST1H3AP68431 136 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 MEP1BQ16820 701 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 HIST2H3PS2Q5TEC6 136 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 RPL13AP3Q6NVV1 102 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 Q6ZR03 302 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 HIST2H3AQ71DI3 136 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 C1QL2Q7Z5L3 287 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 OR6V1Q8N148 313 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 COQ7Q99807 217 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 HDHD2Q9H0R4 259 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 RPRD1BQ9NQG5 326 aaKnown RBP21.4■■□□□ 1.02
VEGFA-208ENST00000417285 LYVE1Q9Y5Y7 322 aa21.4■■□□□ 1.02
VEGFA-208ENST00000417285 LOC105371242A0A075B767 164 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 IFNL4K9M1U5 179 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 HAX1O00165 279 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 FOXH1O75593 365 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 FAM107AO95990 144 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 EPHA1P21709 976 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 SLC36A3Q495N2 470 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 SPRNQ5BIV9 151 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 FBXW12Q6X9E4 464 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 KLHL36Q8N4N3 616 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 SPICQ8N5J4 248 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 ZNF283Q8N7M2 679 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 CCDC197Q8NCU1 140 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 OR52L1Q8NGH7 329 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 APOBEC3DQ96AK3 386 aaPredicted RBP21.39■■□□□ 1.01
VEGFA-208ENST00000417285 JMJD8Q96S16 334 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 TRIM15Q9C019 465 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 C7orf69Q9H7B7 122 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 PPP1R3CQ9UQK1 317 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 LHFPL6Q9Y693 200 aa21.39■■□□□ 1.01
VEGFA-208ENST00000417285 ANK2Q01484 3957 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 IGHV2-70P01814 119 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 CALB2P22676 271 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 MAGEA2P43356 314 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 COX10Q12887 443 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 TMEM155Q4W5P6 130 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 ZBTB46Q86UZ6 589 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 LRRC28Q86X40 367 aaPredicted RBP21.38■■□□□ 1.01
VEGFA-208ENST00000417285 DHFR2Q86XF0 187 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 SDR9C7Q8NEX9 313 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 SLC26A10Q8NG04 563 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 MAGIXQ9H6Y5 334 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 CDH10Q9Y6N8 788 aa21.38■■□□□ 1.01
VEGFA-208ENST00000417285 DBHP09172 617 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 LCN2P80188 198 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 ECH1Q13011 328 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 LCN8Q6JVE9 175 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 SEMA6DQ8NFY4 1073 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms