RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ZMAT3Q9HA38 289 aaKnown RBP12.13□□□□□ -0.47
PAF1-202ENST00000416728 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 NRIP3Q9NQ35 241 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 PTTG3PQ9NZH4 202 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 SIGLEC7Q9Y286 467 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 LRCH1Q9Y2L9 728 aa12.13□□□□□ -0.47
PAF1-202ENST00000416728 TANC2Q9HCD6 1990 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 A0A1W2PRQ8 180 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 RER1O15258 196 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 PTP4A3O75365 173 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 H1F0P07305 194 aaKnown RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 DBHP09172 617 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 GSK3BP49841 420 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 BAMBIQ13145 260 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 DGCR6Q14129 220 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 HLXQ14774 488 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 OR2T2Q6IF00 324 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 SHISA2Q6UWI4 295 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 FBXW12Q6X9E4 464 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 BCL6BQ8N143 479 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 OR8G5Q8NG78 346 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 OR13G1Q8NGZ3 307 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 APOBEC3DQ96AK3 386 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 RSRC1Q96IZ7 334 aaKnown RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 MEGF10Q96KG7 1140 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 ZNF582Q96NG8 517 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 HOPXQ9BPY8 73 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 SSBP3Q9BWW4 388 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 MS4A7Q9GZW8 240 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 NUAK2Q9H093 628 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 IL20RAQ9UHF4 553 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 FAM32AQ9Y421 112 aaKnown RBP12.12□□□□□ -0.47
PAF1-202ENST00000416728 IER3IP1Q9Y5U9 82 aa12.12□□□□□ -0.47
PAF1-202ENST00000416728 ARHGAP32A7KAX9 2087 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 NDUFAB1O14561 156 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 IMPA2O14732 288 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 WNT2P09544 360 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 COX4I1P13073 169 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 RPS2P15880 293 aaKnown RBP12.11□□□□□ -0.47
PAF1-202ENST00000416728 CPT2P23786 658 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 CENPAP49450 140 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 SRP9P49458 86 aaKnown RBP12.11□□□□□ -0.47
PAF1-202ENST00000416728 RPS6KA3P51812 740 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 KCNMB1Q16558 191 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 BTNL3Q6UXE8 466 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 DPY19L2P2Q6ZN68 376 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 PTCHD4Q6ZW05 846 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 TSEN54Q7Z6J9 526 aaKnown RBP12.11□□□□□ -0.47
PAF1-202ENST00000416728 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.11□□□□□ -0.47
PAF1-202ENST00000416728 GJC3Q8NFK1 279 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 ZNF420Q8TAQ5 688 aaPredicted RBP12.11□□□□□ -0.47
PAF1-202ENST00000416728 KCTD14Q9BQ13 255 aaPredicted RBP12.11□□□□□ -0.47
PAF1-202ENST00000416728 C1QTNF5Q9BXJ0 243 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 KRCC1Q9NPI7 259 aaPredicted RBP12.11□□□□□ -0.47
PAF1-202ENST00000416728 RPS6KA6Q9UK32 745 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 AURKCQ9UQB9 309 aa12.11□□□□□ -0.47
PAF1-202ENST00000416728 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 ZNF205O95201 554 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 CYB5R3P00387 301 aaPredicted RBP12.1□□□□□ -0.47
PAF1-202ENST00000416728 NCK1P16333 377 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 CRABP1P29762 137 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 CD80P33681 288 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 OMPP47874 163 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 PAX8Q06710 450 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 PRR31Q5SQ13 230 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 BHLHE23Q8NDY6 225 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 OR52E2Q8NGJ4 325 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 SLC25A28Q96A46 364 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 PLEKHA8Q96JA3 519 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 C1orf147Q96MC9 270 aaPredicted RBP12.1□□□□□ -0.47
PAF1-202ENST00000416728 ZNF48Q96MX3 618 aaPredicted RBP12.1□□□□□ -0.47
PAF1-202ENST00000416728 COQ7Q99807 217 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 EFCAB1Q9HAE3 211 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 TMEM165Q9HC07 324 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 NDUFAF4Q9P032 175 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
PAF1-202ENST00000416728 TRBV4-1A0A0J9YWV2 114 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 IGHV3-64DA0A0J9YX35 117 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 UNC119BA6NIH7 251 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 LRRC30A6NM36 301 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 IQCF6A8MYZ5 107 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 CCDC22O60826 627 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 GPANK1O95872 356 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 TXNDC12O95881 172 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 RNASE1P07998 156 aaKnown RBP12.09□□□□□ -0.47
PAF1-202ENST00000416728 PPIAL4GP0DN37 164 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 RHCEP18577 417 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 CDKN2AP42771 156 aaKnown RBP12.09□□□□□ -0.47
PAF1-202ENST00000416728 MTNR1AP48039 350 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 NUDT2P50583 147 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 FXYD6P3P58550 94 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 GNB2P62879 340 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 HIST1H3AP68431 136 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 MEP1BQ16820 701 aa12.09□□□□□ -0.47
PAF1-202ENST00000416728 HIST2H3PS2Q5TEC6 136 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms