RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 SLC25A21Q9BQT8 299 aaPredicted RBP13.15□□□□□ -0.3
LINC00475-202ENST00000416438 MED9Q9NWA0 146 aa13.15□□□□□ -0.3
LINC00475-202ENST00000416438 SUSD2Q9UGT4 822 aa13.15□□□□□ -0.3
LINC00475-202ENST00000416438 GDF2Q9UK05 429 aaPredicted RBP13.15□□□□□ -0.3
LINC00475-202ENST00000416438 NPIPA5E9PKD4 350 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 H3BML4 177 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 KCNAB3O43448 404 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 SNAPC5O75971 98 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 CD34P28906 385 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 SLC51BQ86UW2 128 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.14□□□□□ -0.31
LINC00475-202ENST00000416438 ZNF584Q8IVC4 421 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 PAQR4Q8N4S7 273 aaPredicted RBP13.14□□□□□ -0.31
LINC00475-202ENST00000416438 ZNF441Q8N8Z8 693 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 ASB10Q8WXI3 467 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 PDCD10Q9BUL8 212 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 TMEM185BQ9H7F4 350 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 NPIPA1Q9UND3 350 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 RHBDD3Q9Y3P4 386 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 HRH3Q9Y5N1 445 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 ABCA7Q8IZY2 2146 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 TRIM77I1YAP6 450 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 RAB27BO00194 218 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 OR2T1O43869 369 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 IGHMP01871 453 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 MELTFP08582 738 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 H2BFMP0C1H6 154 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 CD27P26842 260 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 TOMM20Q15388 145 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 RHOUQ7L0Q8 258 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 OVCH2Q7RTZ1 564 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 LYPD6Q86Y78 171 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 ST8SIA2Q92186 375 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 MRGPRFQ96AM1 343 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 ZBTB8AQ96BR9 441 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 SPACA5Q96QH8 159 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 SCPEP1Q9HB40 452 aa13.14□□□□□ -0.31
LINC00475-202ENST00000416438 IGHV1OR21-1A0A087WYE8 117 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 AQP8O94778 261 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 HPP00738 406 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 CD74P04233 296 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 CD37P11049 281 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 AVPR2P30518 371 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 CSNK1EP49674 416 aaKnown RBP13.13□□□□□ -0.31
LINC00475-202ENST00000416438 ARHGDIBP52566 201 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 BAMBIQ13145 260 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 UNC119Q13432 240 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 ZNF260Q3ZCT1 412 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 ATRAIDQ6UW56 229 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 SYT13Q7L8C5 426 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 TRAPPC6BQ86SZ2 158 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 BOLLQ8N9W6 283 aaKnown RBP13.13□□□□□ -0.31
LINC00475-202ENST00000416438 OR5M8Q8NGP6 311 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 ADAT3Q96EY9 351 aaPredicted RBP13.13□□□□□ -0.31
LINC00475-202ENST00000416438 ZNF75AQ96N20 296 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 SLC2A4RGQ9NR83 387 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 MEGF11A6BM72 1044 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 OR14I1A6ND48 311 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 METTL12A8MUP2 240 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 LMO7DNF2Z398 122 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 GNB3P16520 340 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 RNF4P78317 190 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 PPP1R1AQ13522 171 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 C1orf100Q5SVJ3 147 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 MVB12AQ96EY5 273 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 C5orf34Q96MH7 638 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 KCNK17Q96T54 332 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 MICU1Q9BPX6 476 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 SOX7Q9BT81 388 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 EDEM2Q9BV94 578 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 CST11Q9H112 138 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 LMAN1LQ9HAT1 526 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 SLC5A6Q9Y289 635 aa13.13□□□□□ -0.31
LINC00475-202ENST00000416438 KRBOX1C9JBD0 128 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 D6RAR5 112 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 ISG15P05161 165 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 LUMP51884 338 aaPredicted RBP13.12□□□□□ -0.31
LINC00475-202ENST00000416438 CAPZA1P52907 286 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 ATP1B3P54709 279 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 TLE3Q04726 772 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 TDGQ13569 410 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 DMRTC1Q5HYR2 192 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 CLVS2Q5SYC1 327 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 ZNF813Q6ZN06 617 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 CASTOR1Q8WTX7 329 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 C11orf40Q8WZ69 217 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 AQP3Q92482 292 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 MRPS24Q96EL2 167 aaKnown RBP13.12□□□□□ -0.31
LINC00475-202ENST00000416438 CHRNA10Q9GZZ6 450 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 C12orf4Q9NQ89 552 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 A0A1B0GTI1 187 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 TTRP02766 147 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 HSF1Q00613 529 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 RNASE10Q5GAN6 216 aaKnown RBP13.12□□□□□ -0.31
LINC00475-202ENST00000416438 TMEM244Q5VVB8 128 aa13.12□□□□□ -0.31
LINC00475-202ENST00000416438 ZNF704Q6ZNC4 412 aaPredicted RBP13.12□□□□□ -0.31
LINC00475-202ENST00000416438 H1FNTQ75WM6 255 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms