RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 WNT2BQ93097 391 aa8.79□□□□□ -1
SS18-203ENST00000415083 KCNK17Q96T54 332 aa8.79□□□□□ -1
SS18-203ENST00000415083 CMKLR1Q99788 373 aa8.79□□□□□ -1
SS18-203ENST00000415083 NICN1Q9BSH3 213 aa8.79□□□□□ -1
SS18-203ENST00000415083 MED29Q9NX70 200 aa8.79□□□□□ -1
SS18-203ENST00000415083 ZNF319Q9P2F9 582 aa8.79□□□□□ -1
SS18-203ENST00000415083 CTSFQ9UBX1 484 aa8.79□□□□□ -1
SS18-203ENST00000415083 ARID1AO14497 2285 aa8.79□□□□□ -1
SS18-203ENST00000415083 COL6A3P12111 3177 aa8.79□□□□□ -1
SS18-203ENST00000415083 UNC13CQ8NB66 2214 aa8.79□□□□□ -1
SS18-203ENST00000415083 CPED1A4D0V7 1026 aa8.79□□□□□ -1
SS18-203ENST00000415083 SDC3O75056 442 aa8.79□□□□□ -1
SS18-203ENST00000415083 PMS2P2O95744 297 aa8.79□□□□□ -1
SS18-203ENST00000415083 IL2RAP01589 272 aa8.79□□□□□ -1
SS18-203ENST00000415083 TTRP02766 147 aa8.79□□□□□ -1
SS18-203ENST00000415083 ZNF17P17021 662 aa8.79□□□□□ -1
SS18-203ENST00000415083 TAS2R19P59542 299 aa8.79□□□□□ -1
SS18-203ENST00000415083 SRSF3P84103 164 aaKnown RBP8.79□□□□□ -1
SS18-203ENST00000415083 C3orf33Q6P1S2 294 aa8.79□□□□□ -1
SS18-203ENST00000415083 ZNF529Q6P280 563 aa8.79□□□□□ -1
SS18-203ENST00000415083 KRT77Q7Z794 578 aa8.79□□□□□ -1
SS18-203ENST00000415083 ADGRE4PQ86SQ3 457 aa8.79□□□□□ -1
SS18-203ENST00000415083 FJX1Q86VR8 437 aa8.79□□□□□ -1
SS18-203ENST00000415083 KCNRGQ8N5I3 272 aa8.79□□□□□ -1
SS18-203ENST00000415083 ADAMTS18Q8TE60 1221 aa8.79□□□□□ -1
SS18-203ENST00000415083 NUDCD2Q8WVJ2 157 aa8.79□□□□□ -1
SS18-203ENST00000415083 ASB17Q8WXJ9 295 aa8.79□□□□□ -1
SS18-203ENST00000415083 ROBO4Q8WZ75 1007 aa8.79□□□□□ -1
SS18-203ENST00000415083 NARS2Q96I59 477 aaKnown RBP8.79□□□□□ -1
SS18-203ENST00000415083 TPSD1Q9BZJ3 242 aa8.79□□□□□ -1
SS18-203ENST00000415083 VN1R1Q9GZP7 353 aa8.79□□□□□ -1
SS18-203ENST00000415083 FARSAQ9Y285 508 aaKnown RBP8.79□□□□□ -1
SS18-203ENST00000415083 C2CD4DB7Z1M9 353 aa8.79□□□□□ -1
SS18-203ENST00000415083 PHYHO14832 338 aa8.79□□□□□ -1
SS18-203ENST00000415083 SSBP1Q04837 148 aaKnown RBP8.79□□□□□ -1
SS18-203ENST00000415083 LRRC37A5PQ49AS3 106 aa8.79□□□□□ -1
SS18-203ENST00000415083 ELP2Q6IA86 826 aa8.79□□□□□ -1
SS18-203ENST00000415083 COX15Q7KZN9 410 aa8.79□□□□□ -1
SS18-203ENST00000415083 MAMDC2Q7Z304 686 aaPredicted RBP8.79□□□□□ -1
SS18-203ENST00000415083 ZNF546Q86UE3 836 aa8.79□□□□□ -1
SS18-203ENST00000415083 BPIFB2Q8N4F0 458 aa8.79□□□□□ -1
SS18-203ENST00000415083 OIT3Q8WWZ8 545 aa8.79□□□□□ -1
SS18-203ENST00000415083 KLHDC7BQ96G42 594 aa8.79□□□□□ -1
SS18-203ENST00000415083 DPYSL5Q9BPU6 564 aa8.79□□□□□ -1
SS18-203ENST00000415083 SOHLH2Q9NX45 425 aa8.79□□□□□ -1
SS18-203ENST00000415083 B3GAT1Q9P2W7 334 aa8.79□□□□□ -1
SS18-203ENST00000415083 OR52A1Q9UKL2 312 aa8.79□□□□□ -1
SS18-203ENST00000415083 LOC100509620A0A075B734 347 aa8.78□□□□□ -1
SS18-203ENST00000415083 UBE2QL1A1L167 161 aa8.78□□□□□ -1
SS18-203ENST00000415083 LILRA5A6NI73 299 aa8.78□□□□□ -1
SS18-203ENST00000415083 SULT1C2O00338 296 aa8.78□□□□□ -1
SS18-203ENST00000415083 VSIG8P0DPA2 414 aa8.78□□□□□ -1
SS18-203ENST00000415083 FAUP35544 74 aaKnown RBP8.78□□□□□ -1
SS18-203ENST00000415083 CD96P40200 585 aa8.78□□□□□ -1
SS18-203ENST00000415083 SLC26A5P58743 744 aa8.78□□□□□ -1
SS18-203ENST00000415083 MFAP5Q13361 173 aa8.78□□□□□ -1
SS18-203ENST00000415083 TDGQ13569 410 aa8.78□□□□□ -1
SS18-203ENST00000415083 ATXN7L3Q14CW9 347 aaPredicted RBP8.78□□□□□ -1
SS18-203ENST00000415083 RHOUQ7L0Q8 258 aa8.78□□□□□ -1
SS18-203ENST00000415083 SLC25A42Q86VD7 318 aa8.78□□□□□ -1
SS18-203ENST00000415083 BPIFCQ8NFQ6 507 aa8.78□□□□□ -1
SS18-203ENST00000415083 LMX1AQ8TE12 382 aa8.78□□□□□ -1
SS18-203ENST00000415083 RRNAD1Q96FB5 475 aaKnown RBP8.78□□□□□ -1
SS18-203ENST00000415083 SLC38A3Q99624 504 aa8.78□□□□□ -1
SS18-203ENST00000415083 SAV1Q9H4B6 383 aaPredicted RBP8.78□□□□□ -1
SS18-203ENST00000415083 PRR13Q9NZ81 148 aa8.78□□□□□ -1
SS18-203ENST00000415083 IGHV1OR15-9A0A0B4J2B8 117 aa8.78□□□□□ -1
SS18-203ENST00000415083 TLCD2A6NGC4 264 aa8.78□□□□□ -1
SS18-203ENST00000415083 DBX1A6NMT0 343 aa8.78□□□□□ -1
SS18-203ENST00000415083 MPTX1A8MV57 137 aa8.78□□□□□ -1
SS18-203ENST00000415083 ZNF814B7Z6K7 855 aa8.78□□□□□ -1
SS18-203ENST00000415083 TMEM150CB9EJG8 249 aa8.78□□□□□ -1
SS18-203ENST00000415083 RAD51DO75771 328 aa8.78□□□□□ -1
SS18-203ENST00000415083 MT-ATP6P00846 226 aa8.78□□□□□ -1
SS18-203ENST00000415083 FOSL2P15408 326 aa8.78□□□□□ -1
SS18-203ENST00000415083 NME1P15531 152 aaKnown RBP8.78□□□□□ -1
SS18-203ENST00000415083 IL32P24001 234 aa8.78□□□□□ -1
SS18-203ENST00000415083 SLC6A8P48029 635 aa8.78□□□□□ -1
SS18-203ENST00000415083 LUMP51884 338 aaPredicted RBP8.78□□□□□ -1
SS18-203ENST00000415083 POLR2HP52434 150 aaKnown RBP8.78□□□□□ -1
SS18-203ENST00000415083 AKR1C2P52895 323 aa8.78□□□□□ -1
SS18-203ENST00000415083 CAPZA1P52907 286 aa8.78□□□□□ -1
SS18-203ENST00000415083 OR1D5P58170 312 aa8.78□□□□□ -1
SS18-203ENST00000415083 AKR1C1Q04828 323 aa8.78□□□□□ -1
SS18-203ENST00000415083 ELAVL1Q15717 326 aaKnown RBP8.78□□□□□ -1
SS18-203ENST00000415083 C1orf189Q5VU69 101 aa8.78□□□□□ -1
SS18-203ENST00000415083 C11orf87Q6NUJ2 197 aa8.78□□□□□ -1
SS18-203ENST00000415083 TMPRSS9Q7Z410 1059 aa8.78□□□□□ -1
SS18-203ENST00000415083 OR1N1Q8NGS0 311 aa8.78□□□□□ -1
SS18-203ENST00000415083 OR13C3Q8NGS6 347 aa8.78□□□□□ -1
SS18-203ENST00000415083 UCK1Q9HA47 277 aa8.78□□□□□ -1
SS18-203ENST00000415083 SLC2A8Q9NY64 477 aa8.78□□□□□ -1
SS18-203ENST00000415083 MRTO4Q9UKD2 239 aaKnown RBP8.78□□□□□ -1
SS18-203ENST00000415083 NCOA6Q14686 2063 aaPredicted RBP8.78□□□□□ -1
SS18-203ENST00000415083 A0A1W2PP11 408 aa8.77□□□□□ -1
SS18-203ENST00000415083 A8MVM7 634 aa8.77□□□□□ -1
SS18-203ENST00000415083 KRBOX1C9JBD0 128 aa8.77□□□□□ -1
SS18-203ENST00000415083 H0YIZ8 118 aa8.77□□□□□ -1
SS18-203ENST00000415083 XKRYO14609 159 aa8.77□□□□□ -1
SS18-203ENST00000415083 SLC25A12O75746 678 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms