RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 HPS1Q92902 700 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 PTP4A1Q93096 173 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 YIPF5Q969M3 257 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 ELMOD3Q96FG2 381 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 DIRC2Q96SL1 478 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 PITX2Q99697 317 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 COQ7Q99807 217 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 BEX2Q9BXY8 128 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 PLA2G12AQ9BZM1 189 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 ZNF556Q9HAH1 456 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 ZNF275Q9NSD4 429 aaPredicted RBP9.56□□□□□ -0.88
RFFL-204ENST00000414419 VNN3Q9NY84 501 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 KLHL21Q9UJP4 597 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 CDC42EP3Q9UKI2 254 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 ZDHHC8Q9ULC8 765 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 STARD10Q9Y365 291 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 LHFPL6Q9Y693 200 aa9.56□□□□□ -0.88
RFFL-204ENST00000414419 RIIAD1A6NNX1 92 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 J3QW42 95 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 ATP5HO75947 161 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 IFNA2P01563 188 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 IGHV1-46P01743 117 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 TFP02787 698 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 DBHP09172 617 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 TNFSF4P23510 183 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 PYCR1P32322 319 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 CRYBB2P43320 205 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 HIST1H3AP68431 136 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 ECH1Q13011 328 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 PSG7Q13046 419 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 HIST2H3PS2Q5TEC6 136 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 HIST2H3AQ71DI3 136 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 SLC37A3Q8NCC5 494 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 OR8D4Q8NGM9 314 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 GTF3AQ92664 365 aaKnown RBP9.55□□□□□ -0.88
RFFL-204ENST00000414419 APOBEC3DQ96AK3 386 aaPredicted RBP9.55□□□□□ -0.88
RFFL-204ENST00000414419 SLC7A6OSQ96CW6 309 aaPredicted RBP9.55□□□□□ -0.88
RFFL-204ENST00000414419 CMBLQ96DG6 245 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 MSI2Q96DH6 328 aaKnown RBP9.55□□□□□ -0.88
RFFL-204ENST00000414419 TIMD4Q96H15 378 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 FEVQ99581 238 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 SHARPINQ9H0F6 387 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 NARFLQ9H6Q4 476 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 ARMC1Q9NVT9 282 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 TMEM160Q9NX00 188 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 PDP1Q9P0J1 537 aaPredicted RBP9.55□□□□□ -0.88
RFFL-204ENST00000414419 LPAR3Q9UBY5 353 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 KCNG2Q9UJ96 466 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 POMPQ9Y244 141 aa9.55□□□□□ -0.88
RFFL-204ENST00000414419 ARRDC5A6NEK1 342 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 CLDN25C9JDP6 229 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 F5H5K5 113 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 GSC2O15499 205 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 ZNF3P17036 446 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 HNF1AP20823 631 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 FMO3P31513 532 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 BLVRAP53004 296 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 CBX1P83916 185 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 TNFAIP6P98066 277 aaPredicted RBP9.54□□□□□ -0.88
RFFL-204ENST00000414419 SLC3A1Q07837 685 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 DBPQ10586 325 aaPredicted RBP9.54□□□□□ -0.88
RFFL-204ENST00000414419 BNIP1Q12981 228 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 CCNIQ14094 377 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 CRMP1Q14194 572 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 SLC18B1Q6NT16 456 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 CD300LDQ6UXZ3 194 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 PEG10Q86TG7 708 aaKnown RBP9.54□□□□□ -0.88
RFFL-204ENST00000414419 LINC01356Q8N9X3 169 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 OR51L1Q8NGJ5 315 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 OR9Q1Q8NGQ5 310 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 CCL17Q92583 94 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 RAB1CQ92928 201 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 OTULINQ96BN8 352 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 HAVCR1Q96D42 359 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 ATF6BQ99941 703 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 NIPSNAP1Q9BPW8 284 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 MSL2Q9HCI7 577 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 PTTG3PQ9NZH4 202 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 CYB5R1Q9UHQ9 305 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 PURGQ9UJV8 347 aaKnown RBP9.54□□□□□ -0.88
RFFL-204ENST00000414419 TANC2Q9HCD6 1990 aa9.54□□□□□ -0.88
RFFL-204ENST00000414419 TVP23AA6NH52 213 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 ZSCAN5BA6NJL1 495 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 SURF4O15260 269 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 FKBP6O75344 327 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 RP2O75695 350 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 LCATP04180 440 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 ADH4P08319 380 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 ANXA8P13928 327 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 RAC2P15153 192 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 TNFRSF1AP19438 455 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 KITLGP21583 273 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 PAICSP22234 425 aaKnown RBP9.53□□□□□ -0.88
RFFL-204ENST00000414419 POU1F1P28069 291 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 IL2RGP31785 369 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 GGT2P36268 569 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 ERFP50548 548 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 CDH15P55291 814 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 TPTEP56180 551 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 MVKQ03426 396 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms