RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 SLC2A2P11168 524 aaPredicted RBP15.13■□□□□ 0.01
PTPRC-206ENST00000413409 ATF1P18846 271 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 RIDAP52758 137 aaKnown RBP15.13■□□□□ 0.01
PTPRC-206ENST00000413409 IL18Q14116 193 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 MEP1BQ16820 701 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 TRIQKQ629K1 86 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 TIGD3Q6B0B8 471 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 DEGS2Q6QHC5 323 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 CADM3Q8N126 398 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 KDM8Q8N371 416 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 Q8N402 240 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 SAMD12Q8N8I0 201 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 OR1J4Q8NGS1 313 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 GPR148Q8TDV2 347 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 CHAC2Q8WUX2 184 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 ITPKCQ96DU7 683 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 OXGR1Q96P68 337 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 DMRTA2Q96SC8 542 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 KCNJ15Q99712 375 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 MRPL13Q9BYD1 178 aaKnown RBP15.13■□□□□ 0.01
PTPRC-206ENST00000413409 ELOVL3Q9HB03 270 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 DKKL1Q9UK85 242 aa15.13■□□□□ 0.01
PTPRC-206ENST00000413409 HRNRQ86YZ3 2850 aaPredicted RBP15.12■□□□□ 0.01
PTPRC-206ENST00000413409 ACOD1A6NK06 481 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 AIPO00170 330 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 GPR171O14626 319 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 IGHG1P01857 330 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 EIF4EP06730 217 aaKnown RBP15.12■□□□□ 0.01
PTPRC-206ENST00000413409 ZNF823P16415 610 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 SRMP19623 302 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 NR4A2P43354 598 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 KIR3DL2P43630 455 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 BIDP55957 195 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 EIF2B1Q14232 305 aaKnown RBP15.12■□□□□ 0.01
PTPRC-206ENST00000413409 ETFDHQ16134 617 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 THEM4Q5T1C6 240 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 HACD4Q5VWC8 232 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 C3P1Q6ZMU1 363 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 GLB1L2Q8IW92 636 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 ZNF676Q8N7Q3 588 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 OR4M1Q8NGD0 313 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 OR6X1Q8NH79 312 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 CA5BP1Q8WTZ4 195 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 TXNDC15Q96J42 360 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 RBP7Q96R05 134 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 ABHD6Q9BV23 337 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 MED29Q9NX70 200 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 SPATA2Q9UM82 520 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 GTF3C1Q12789 2109 aa15.12■□□□□ 0.01
PTPRC-206ENST00000413409 HCFC1P51610 2035 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 A0A1W2PNR3 127 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 DNPH1O43598 174 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 CBR3O75828 277 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 PGA4P0DJD7 388 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 PGA3P0DJD8 388 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 NR2C1P13056 603 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 CFPP27918 469 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 RPS27P42677 84 aaKnown RBP15.11■□□□□ 0.01
PTPRC-206ENST00000413409 RFX2P48378 723 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 FMODQ06828 376 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 P2RY14Q15391 338 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 WDR38Q5JTN6 314 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 PYHIN1Q6K0P9 492 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 LRRN1Q6UXK5 716 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 TMPPEQ6ZT21 453 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 KRT77Q7Z794 578 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 BIVMQ86UB2 503 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 PRSS35Q8N3Z0 413 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 OR5M1Q8NGP8 315 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 NINJ1Q92982 152 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 SLC25A44Q96H78 314 aaPredicted RBP15.11■□□□□ 0.01
PTPRC-206ENST00000413409 GPR137Q96N19 417 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 TMEM185BQ9H7F4 350 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 B3GAT2Q9NPZ5 323 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 MALT1Q9UDY8 824 aa15.11■□□□□ 0.01
PTPRC-206ENST00000413409 GJE1A6NN92 205 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 SULT2B1O00204 365 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 EIF1BO60739 113 aaKnown RBP15.1■□□□□ 0.01
PTPRC-206ENST00000413409 P04436 131 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 SRD5A2P31213 254 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 SFTPDP35247 375 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 SCAND1P57086 179 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 TFF3Q07654 80 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 POU4F3Q15319 338 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 TAB1Q15750 504 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 TMEM176BQ3YBM2 270 aaPredicted RBP15.1■□□□□ 0.01
PTPRC-206ENST00000413409 RAET1LQ5VY80 246 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 NRARPQ7Z6K4 114 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 CATSPERDQ86XM0 798 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 DOLPP1Q86YN1 238 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 WDFY1Q8IWB7 410 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 DMRTC2Q8IXT2 367 aaPredicted RBP15.1■□□□□ 0.01
PTPRC-206ENST00000413409 C19orf18Q8NEA5 215 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 ST7LQ8TDW4 575 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 ZC3HAV1LQ96H79 300 aaKnown RBP15.1■□□□□ 0.01
PTPRC-206ENST00000413409 GFI1Q99684 422 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 ING1Q9UK53 422 aaPredicted RBP15.1■□□□□ 0.01
PTPRC-206ENST00000413409 AK6Q9Y3D8 172 aaKnown RBP15.1■□□□□ 0.01
PTPRC-206ENST00000413409 LRP12Q9Y561 859 aa15.1■□□□□ 0.01
PTPRC-206ENST00000413409 R4GMQ9 66 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms