RNA–Protein interactions for RNA: ENST00000412148.5

CCDC88A-203, Transcript of coiled-coil domain containing 88A, humanhuman

TSL 1 (best)

Gene CCDC88A, Length 2,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88A-203ENST00000412148 SLC26A10Q8NG04 563 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 OR4K17Q8NGC6 315 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 CCL4L1Q8NHW4 92 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 NUBPLQ8TB37 319 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 FAM46BQ96A09 425 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 OR5B2Q96R09 309 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 ABHD6Q9BV23 337 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 TUBA4BQ9H853 241 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 MBD2Q9UBB5 411 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 FOXD3Q9UJU5 478 aaPredicted RBP5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 SLC5A6Q9Y289 635 aa5.14□□□□□ -1.59
CCDC88A-203ENST00000412148 CEP350Q5VT06 3117 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 WIPF3A6NGB9 483 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 LILRA5A6NI73 299 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 A8MVM7 634 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 FTCDNL1E5RQL4 147 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PLPP3O14495 311 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 OIP5O43482 229 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ALOX12BO75342 701 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 SLC25A12O75746 678 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 STK17BO94768 372 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 GAPDHP04406 335 aaKnown RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ABOP16442 354 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ADCYAP1P18509 176 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 CD1CP29017 333 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 BDKRB2P30411 391 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 GDI1P31150 447 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 FASLGP48023 281 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ZNF84P51523 738 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 UCP2P55851 309 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ADAM8P78325 824 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 OC90Q02509 493 aaPredicted RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PJVKQ0ZLH3 352 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PPP1R1AQ13522 171 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PPA1Q15181 289 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 RNF212Q495C1 297 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 EIF5AL1Q6IS14 154 aaKnown RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PRSS54Q6PEW0 395 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 Q6ZSR3 168 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 LHFPL1Q86WI0 220 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 LDLRAD3Q86YD5 345 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 KDM8Q8N371 416 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 SLC22A24Q8N4F4 322 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 COMMD1Q8N668 190 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 RELL2Q8NC24 303 aaPredicted RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 OR1S2Q8NGQ3 325 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 OR10G6Q8NH81 332 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ADAMTS17Q8TE56 1095 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 RNF138Q8WVD3 245 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 RNF133Q8WVZ7 376 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 METTL21AQ8WXB1 218 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PMEPA1Q969W9 287 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 SLC25A44Q96H78 314 aaPredicted RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 TSNAXQ99598 290 aaKnown RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 GPR174Q9BXC1 333 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PLA2G2FQ9BZM2 168 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 FAM60AQ9NP50 221 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 LANCL2Q9NS86 450 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ZFP57Q9NU63 452 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 TAS2R4Q9NYW5 299 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ASH2LQ9UBL3 628 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 NOP16Q9Y3C1 178 aaKnown RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 WIF1Q9Y5W5 379 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 A0A1B0GTH9 108 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 FIGNL2A6NMB9 653 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 CHURC1-FNTBB4DL54 471 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 SLC31A1O15431 190 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ZNF208O43345 1280 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 HCRTR1O43613 425 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 F12P00748 615 aaPredicted RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 F13BP05160 661 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 FCER2P06734 321 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PET100P0DJ07 73 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PVRP15151 417 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ST6GAL1P15907 406 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 SDHBP21912 280 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 CCL1P22362 96 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 CXCR1P25024 350 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ATP1B3P54709 279 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 IL13RA1P78552 427 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ZNF117Q03924 483 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 MFGE8Q08431 387 aaPredicted RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 MELKQ14680 651 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ACKR1Q16570 336 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 MST1LQ2TV78 715 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PLEKHN1Q494U1 663 aaPredicted RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 GXYLT1Q4G148 440 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 RTL6Q6ICC9 239 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 CORO6Q6QEF8 472 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 CBLN3Q6UW01 205 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 GRINAQ7Z429 371 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 GTPBP8Q8N3Z3 284 aaPredicted RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ZNF441Q8N8Z8 693 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 ADPRHL1Q8NDY3 354 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 SVIPQ8NHG7 77 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PHOSPHO1Q8TCT1 267 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 SLC37A2Q8TED4 501 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 SSC4DQ8WTU2 575 aa5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PTPMT1Q8WUK0 201 aaPredicted RBP5.13□□□□□ -1.59
CCDC88A-203ENST00000412148 PHF3Q92576 2039 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms