RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 ARL9Q6T311 187 aa20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 UNQ6126/PRO20091Q6UXV3 157 aa20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 ZBTB49Q6ZSB9 765 aa20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 ZCCHC24Q8N2G6 241 aaKnown RBP20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 SYNPRQ8TBG9 265 aa20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 SLC25A40Q8TBP6 338 aa20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 IL4I1Q96RQ9 567 aa20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 ATF6BQ99941 703 aa20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 VRK1Q99986 396 aaPredicted RBP20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 MARCH7Q9H992 704 aa20.47■□□□□ 0.87
UBE2E3-202ENST00000410062 ZNF250P15622 560 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 EVX1P49640 407 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 RAD23AP54725 363 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 PPP1CBP62140 327 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 SLC35D3Q5M8T2 416 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 DPY19L4Q7Z388 723 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 TIGD4Q8IY51 512 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 TMEM163Q8TC26 289 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 OR2J1Q9GZK6 312 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 SELENOFO60613 162 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 ANPEPP15144 967 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 MAD2L1BPQ15013 274 aaPredicted RBP20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 ALKBH6Q3KRA9 238 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 MARS2Q96GW9 593 aaKnown RBP20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 POFUT1Q9H488 388 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 DYNLRB1Q9NP97 96 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 TBCCD1Q9NVR7 557 aa20.46■□□□□ 0.87
UBE2E3-202ENST00000410062 A0A1W2PPW3 197 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 CCDC182A6NF36 153 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 F5H5K5 113 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 ADRA2AP08913 450 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 MPV17P39210 176 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 NAA10P41227 235 aaPredicted RBP20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 ALDH3B1P43353 468 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 PPOXP50336 477 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 KLF3P57682 345 aaPredicted RBP20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 ECH1Q13011 328 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 EIF2B1Q14232 305 aaKnown RBP20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 KRTAP27-1Q3LI81 207 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 ZNF718Q3SXZ3 478 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 PRSS57Q6UWY2 283 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 SPATC1Q76KD6 591 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 ST7LQ8TDW4 575 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 SLAMF6Q96DU3 332 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 SORCS2Q96PQ0 1159 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 DCLRE1CQ96SD1 692 aaKnown RBP20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 TEAD3Q99594 435 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 STARD10Q9Y365 291 aa20.45■□□□□ 0.86
UBE2E3-202ENST00000410062 HIVEP1P15822 2718 aa20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 LY6HO94772 140 aa20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 SELENOVP59797 346 aa20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 KLF14Q8TD94 323 aaPredicted RBP20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 Q96MF0 132 aa20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 MBOAT4Q96T53 435 aa20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 TOR3AQ9H497 397 aa20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 CENPMQ9NSP4 180 aa20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 TAAR3PQ9P1P4 343 aa20.44■□□□□ 0.86
UBE2E3-202ENST00000410062 IGLV3-9A0A075B6K5 115 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 M0R233 179 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 SSX4O60224 188 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 ACSM4P0C7M7 580 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 GCH1P30793 250 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 TMEM255AQ5JRV8 349 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 AADACL4Q5VUY2 407 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 NAA40Q86UY6 237 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 TGIF2LYQ8IUE0 185 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 C1orf174Q8IYL3 243 aa20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 IPCEF1Q8WWN9 437 aaPredicted RBP20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 BARX1Q9HBU1 254 aaPredicted RBP20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 DDX28Q9NUL7 540 aaKnown RBP20.43■□□□□ 0.86
UBE2E3-202ENST00000410062 NUDT6P53370 316 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 TRIP10Q15642 601 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 LRRC36Q1X8D7 754 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 NXNL2Q5VZ03 156 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 SHFQ7M4L6 423 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 AMELYQ99218 206 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 COPS4Q9BT78 406 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 ABHD6Q9BV23 337 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 TPK1Q9H3S4 243 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 H2AFY2Q9P0M6 372 aaPredicted RBP20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 FBXO9Q9UK97 447 aaPredicted RBP20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 MRPL3P09001 348 aaKnown RBP20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 NAT2P11245 290 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 RGS6P49758 472 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 EFNA4P52798 201 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 CDC42P60953 191 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 ELF3P78545 371 aaPredicted RBP20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 TAF13Q15543 124 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 NKPD1Q17RQ9 610 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 MBNL2Q5VZF2 373 aaKnown RBP20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 LPCAT4Q643R3 524 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 MEPCEQ7L2J0 689 aaKnown RBP20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 FAM81AQ8TBF8 368 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 UBE2FQ969M7 185 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 SPTSSAQ969W0 71 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 HRASLS5Q96KN8 279 aa20.42■□□□□ 0.86
UBE2E3-202ENST00000410062 ZNF878C9JN71 531 aa20.41■□□□□ 0.86
UBE2E3-202ENST00000410062 M0R135 149 aa20.41■□□□□ 0.86
UBE2E3-202ENST00000410062 F12P00748 615 aaPredicted RBP20.41■□□□□ 0.86
UBE2E3-202ENST00000410062 IGHV3-13P01766 116 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms