RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 TMEM2Q9UHN6 1383 aa3.88□□□□□ -1.79
LSM5-206ENST00000409987 TROQ12816 1431 aaPredicted RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 KIAA1107Q9UPP5 1409 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 ARHGAP35Q9NRY4 1499 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 FRMPD3Q5JV73 1810 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 TMEM213A2RRL7 107 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 HCRTR1O43613 425 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 AQP8O94778 261 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 LDOC1O95751 146 aaPredicted RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 OXTP01178 125 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 CATP04040 527 aaKnown RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 GFAPP14136 432 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 ATP6V1B2P21281 511 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 CMA1P23946 247 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 KIR2DS4P43632 304 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 HAAOP46952 286 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 RPL34P49207 117 aaKnown RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 VSNL1P62760 191 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 SLC25A11Q02978 314 aaKnown RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 ZNF92Q03936 586 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 TIMM50Q3ZCQ8 353 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 FAHD1Q6P587 224 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 PLEKHG7Q6ZR37 379 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 DNM1P46Q6ZS02 220 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 UNC93AQ86WB7 457 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 C17orf82Q86X59 251 aaPredicted RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 HSD17B11Q8NBQ5 300 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 CHCHD10Q8WYQ3 142 aaPredicted RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 FRAT1Q92837 279 aaPredicted RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 EEF1AKMT3Q96AZ1 226 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 SLC25A38Q96DW6 304 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 NOL4LQ96MY1 436 aaPredicted RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 ZFP3Q96NJ6 502 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 HIST1H4GQ99525 98 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 ZNF251Q9BRH9 671 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 C7orf50Q9BRJ6 194 aaKnown RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 TIMM29Q9BSF4 260 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 SPZ1Q9BXG8 430 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 SLC38A1Q9H2H9 487 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 UBE2ZQ9H832 354 aaPredicted RBP3.87□□□□□ -1.79
LSM5-206ENST00000409987 SLC38A10Q9HBR0 1119 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 TET3O43151 1660 aa3.87□□□□□ -1.79
LSM5-206ENST00000409987 UNC13BO14795 1591 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 MROH1Q8NDA8 1641 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 A0A0A6YYD5 115 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 A0A0G2JRQ6 117 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 ZNF816-ZNF321PA0A0X1KG74 233 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 A0A1B0GTI1 187 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 A8MX80 341 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 HACD1B0YJ81 288 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 F8VZ95 297 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 SMKR1H3BMG3 65 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 COCHO43405 550 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 SLC35E2P0CK97 266 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 IGLL1P15814 213 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 TEAD1P28347 426 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 BTDP43251 543 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 PRLHRP49683 370 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 SUB1P53999 127 aaKnown RBP eCLIP3.86□□□□□ -1.792e-7■■■■□ 24.9
LSM5-206ENST00000409987 UNC119Q13432 240 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 DMC1Q14565 340 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 OR4D1Q15615 310 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 Q1RN00 199 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 C15orf32Q32M92 178 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 DUPD1Q68J44 220 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 WDR74Q6RFH5 385 aaPredicted RBP3.86□□□□□ -1.79
LSM5-206ENST00000409987 SSX6Q7RTT6 188 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 ZNF571Q7Z3V5 609 aaPredicted RBP3.86□□□□□ -1.79
LSM5-206ENST00000409987 TMEM150AQ86TG1 271 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 SETD3Q86TU7 594 aaPredicted RBP3.86□□□□□ -1.79
LSM5-206ENST00000409987 C12orf56Q8IXR9 622 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 CCDC71LQ8N9Z2 235 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 NECAP1Q8NC96 275 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 DUSP18Q8NEJ0 188 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 VN1R2Q8NFZ6 395 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 OR2L8Q8NGY9 312 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 TYMSOSQ8TAI1 123 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 TMEM54Q969K7 222 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 DNAJC1Q96KC8 554 aaKnown RBP3.86□□□□□ -1.79
LSM5-206ENST00000409987 UQCC2Q9BRT2 126 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 CALN1Q9BXU9 219 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 HES7Q9BYE0 225 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 CHRNA10Q9GZZ6 450 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 NSRP1Q9H0G5 558 aaKnown RBP3.86□□□□□ -1.79
LSM5-206ENST00000409987 SAV1Q9H4B6 383 aaPredicted RBP3.86□□□□□ -1.79
LSM5-206ENST00000409987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.86□□□□□ -1.79
LSM5-206ENST00000409987 DPM3Q9P2X0 92 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 ZNF256Q9Y2P7 627 aaPredicted RBP3.86□□□□□ -1.79
LSM5-206ENST00000409987 DISP2A7MBM2 1401 aa3.86□□□□□ -1.79
LSM5-206ENST00000409987 A0A0A6YYH2 397 aa3.85□□□□□ -1.79
LSM5-206ENST00000409987 RBMY1BA6NDE4 496 aaKnown RBP3.85□□□□□ -1.79
LSM5-206ENST00000409987 RBMY1EA6NEQ0 496 aaKnown RBP3.85□□□□□ -1.79
LSM5-206ENST00000409987 FABP12A6NFH5 140 aa3.85□□□□□ -1.79
LSM5-206ENST00000409987 A6NJ64 397 aa3.85□□□□□ -1.79
LSM5-206ENST00000409987 ERVV-1B6SEH8 477 aa3.85□□□□□ -1.79
LSM5-206ENST00000409987 F6UB75 175 aa3.85□□□□□ -1.79
LSM5-206ENST00000409987 SMLR1H3BR10 107 aa3.85□□□□□ -1.79
LSM5-206ENST00000409987 K7EMT4 169 aa3.85□□□□□ -1.79
LSM5-206ENST00000409987 CDX4O14627 284 aaPredicted RBP3.85□□□□□ -1.79
LSM5-206ENST00000409987 ERI3O43414 337 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms