RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 R4GMQ9 66 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 DCHS1Q96JQ0 3298 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 A0A087WV48 116 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ANKRD61A6NGH8 418 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 RPL36A-HNRNPH2H7BZ11 118 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 K7ENP7 123 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 GATCO43716 136 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 RPP14O95059 124 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 P2RX3P56373 397 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 SRYQ05066 204 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 MFGE8Q08431 387 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 FAPQ12884 760 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF829Q3KNS6 432 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 NRN1LQ496H8 165 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 INO80CQ6PI98 192 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CEACAM19Q7Z692 300 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 NR2C2APQ86WQ0 139 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 CUL9Q8IWT3 2517 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 OR5AK2Q8NH90 309 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 WDFY2Q96P53 400 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ULBP2Q9BZM5 246 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 ZCCHC4Q9H5U6 513 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 SMURF1Q9HCE7 757 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 EMC7Q9NPA0 242 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 G6PC2Q9NQR9 355 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 DDX28Q9NUL7 540 aaKnown RBP4.87□□□□□ -1.63
EPHA4-202ENST00000409854 PEX16Q9Y5Y5 336 aa4.87□□□□□ -1.63
EPHA4-202ENST00000409854 DNAJC13O75165 2243 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 TRBV5-7A0A0A0MS05 114 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 A0A0G2JK05 382 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF879B4DU55 563 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 CLDN25C9JDP6 229 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF878C9JN71 531 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 PIN1P1O15428 100 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ISG15P05161 165 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 BMP4P12644 408 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF16P17020 682 aaPredicted RBP4.86□□□□□ -1.63
EPHA4-202ENST00000409854 NPR2P20594 1047 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 CTSSP25774 331 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 MMP16P51512 607 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF84P51523 738 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 HNRNPA0Q13151 305 aaKnown RBP4.86□□□□□ -1.63
EPHA4-202ENST00000409854 C3AR1Q16581 482 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 Q499Y3 187 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 FAM27D1Q5T7N8 215 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 FAM27BQ5VT28 67 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF627Q7L945 461 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 GPR137CQ8N3F9 429 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 RBMXL3Q8N7X1 1067 aaKnown RBP4.86□□□□□ -1.63
EPHA4-202ENST00000409854 FNDC9Q8TBE3 224 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 THRSPQ92748 146 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 DERL3Q96Q80 235 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 OR14A2Q96R54 314 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 TAAR6Q96RI8 345 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF416Q9BWM5 594 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 WDR12Q9GZL7 423 aaKnown RBP4.86□□□□□ -1.63
EPHA4-202ENST00000409854 LDAHQ9H6V9 325 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 NIPAL2Q9H841 368 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 SEC61A2Q9H9S3 476 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 B3GAT2Q9NPZ5 323 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 TMEM38BQ9NVV0 291 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 FAM206AQ9NX38 181 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 CLCF1Q9UBD9 225 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 FBXL3Q9UKT7 428 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 DOCK7Q96N67 2140 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 A0A1B0GTH9 108 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 CASKO14936 926 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ARL6IP5O75915 188 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 SNAPINO95295 136 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 MAPK3P27361 379 aaPredicted RBP4.86□□□□□ -1.63
EPHA4-202ENST00000409854 AP2S1P53680 142 aaPredicted RBP4.86□□□□□ -1.63
EPHA4-202ENST00000409854 MXD1Q05195 221 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF846Q147U1 533 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 CCDC190Q86UF4 302 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 OR2AJ1Q8NGZ0 328 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF837Q96EG3 531 aaPredicted RBP4.86□□□□□ -1.63
EPHA4-202ENST00000409854 WACQ9BTA9 647 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 COMMD4Q9H0A8 199 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 SLCO5A1Q9H2Y9 848 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 GPR35Q9HC97 309 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 HMG20AQ9NP66 347 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 PARPBPQ9NWS1 579 aa4.86□□□□□ -1.63
EPHA4-202ENST00000409854 TAF4O00268 1085 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 TMEM127O75204 238 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 YES1P07947 543 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 CST2P09228 141 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 H2BFMP0C1H6 154 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 OCM2P0CE71 109 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 OCMP0CE72 109 aaPredicted RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 FCGR2AP12318 317 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 MYL9P24844 172 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 THBS2P35442 1172 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 PSMA6P60900 246 aaKnown RBP4.85□□□□□ -1.63
EPHA4-202ENST00000409854 GUSBP1Q15486 140 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 ZNF544Q6NX49 715 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 TUSC5Q8IXB3 177 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 GRPEL2Q8TAA5 225 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 LHFPL5Q8TAF8 219 aa4.85□□□□□ -1.63
EPHA4-202ENST00000409854 AP3S1Q92572 193 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms