RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 BCAS1O75363 584 aaPredicted RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 GMNNO75496 209 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 STX11O75558 287 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 SERPINB7O75635 380 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 STAMBPO95630 424 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ATP6V1G2O95670 118 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 LGI1O95970 557 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 IFNA14P01570 189 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ALPPP05187 535 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 SERPINA7P05543 415 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 DBIP07108 87 aaKnown RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 NPIPA8P0DM63 369 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ICAM2P13598 275 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 RPL35AP18077 110 aaKnown RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 AQP1P29972 269 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 OTX2P32243 289 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 PTGDSP41222 190 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 MLF1P58340 268 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 HPCAP84074 193 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 VLDLRP98155 873 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 RASGEF1BQ0VAM2 473 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ZNF273Q14593 569 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 RCN1Q15293 331 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 MAPK14Q16539 360 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 NRF1Q16656 503 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 GLIPR1L2Q4G1C9 344 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 GPAT3Q53EU6 434 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ZFP1Q6P2D0 407 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ZNF836Q6ZNA1 936 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 C16orf47Q6ZP98 133 aaPredicted RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 C16orf62Q7Z3J2 963 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 VTCN1Q7Z7D3 282 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 VASH2Q86V25 355 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 P2RY8Q86VZ1 359 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 SPATA24Q86W54 205 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 VRK2Q86Y07 508 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 GRAMD2AQ8IUY3 354 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 SMYD1Q8NB12 490 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 FAM71CQ8NEG0 241 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 OR4D11Q8NGI4 311 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 OR5L2Q8NGL0 311 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 SLC26A7Q8TE54 656 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 FAM222BQ8WU58 562 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 KCNE4Q8WWG9 221 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 RASSF5Q8WWW0 418 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 PYDC1Q8WXC3 89 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 FGF11Q92914 225 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 HGDQ93099 445 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 SLC35B4Q969S0 331 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 KIAA1143Q96AT1 154 aaPredicted RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 EFHD2Q96C19 240 aaPredicted RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 FAM122AQ96E09 287 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 OMA1Q96E52 524 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 PYURFQ96I23 114 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 C7orf34Q96L11 122 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 COL21A1Q96P44 957 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 GAL3ST4Q96RP7 486 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 RASL10BQ96S79 203 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ZNF607Q96SK3 696 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ARHGDIGQ99819 225 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 PKP2Q99959 881 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 WFDC6Q9BQY6 131 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 CABLES2Q9BTV7 478 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 PINK1Q9BXM7 581 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 UGT2B28Q9BY64 529 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 HOXD1Q9GZZ0 328 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 FN3KQ9H479 309 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 DCLRE1BQ9H816 532 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 TRIM45Q9H8W5 580 aaPredicted RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 MTHFD2LQ9H903 347 aaPredicted RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 LIN28AQ9H9Z2 209 aaKnown RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 RNPEPL1Q9HAU8 725 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ZNF160Q9HCG1 818 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 SH2D2AQ9NP31 389 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 IL1RAPQ9NPH3 570 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 STX18Q9P2W9 335 aaKnown RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 RIMS3Q9UJD0 308 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 ZNF443Q9Y2A4 671 aaPredicted RBP3.55□□□□□ -1.84
CLK1-203ENST00000409769 IFT52Q9Y366 437 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 WDR45Q9Y484 360 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 AP4S1Q9Y587 144 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 DNAJC13O75165 2243 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 MED12Q93074 2177 aa3.55□□□□□ -1.84
CLK1-203ENST00000409769 KIAA1549Q9HCM3 1950 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 IGLV3-32A0A0A0MS00 114 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 CLDN24A6NM45 220 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 SNURFLB1AK76 121 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 B4DXG7 233 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 E9PQ18 207 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 WWP2O00308 870 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 FFAR1O14842 300 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 CASQ2O14958 399 aaPredicted RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 ICOSLGO75144 302 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 OR2J2O76002 312 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 UTS2O95399 124 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 OXSR1O95747 527 aaPredicted RBP3.54□□□□□ -1.84
CLK1-203ENST00000409769 ZNF682O95780 498 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 FABP3P05413 133 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 PRKAR1AP10644 381 aa3.54□□□□□ -1.84
CLK1-203ENST00000409769 ANPEPP15144 967 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms