RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 KRTAP27-1Q3LI81 207 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 SLC35D3Q5M8T2 416 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 TGIF2LYQ8IUE0 185 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 SYNPRQ8TBG9 265 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 MARS2Q96GW9 593 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 ATF6BQ99941 703 aa17.04■□□□□ 0.32
PDLIM2-207ENST00000409417 IGLV3-9A0A075B6K5 115 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 TLX2O43763 284 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 PSKH1P11801 424 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 TUBG1P23258 451 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 RGS6P49758 472 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 EFNA4P52798 201 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 RAD23AP54725 363 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 ZNF718Q3SXZ3 478 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 SPATA46Q5T0L3 261 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 DCXRQ7Z4W1 244 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 TIGD4Q8IY51 512 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 OR10S1Q8NGN2 331 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 ZMYND19Q96E35 227 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 VRK1Q99986 396 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 DYNLRB1Q9NP97 96 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 TUBG2Q9NRH3 451 aa17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 DDX28Q9NUL7 540 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 MYEF2Q9P2K5 600 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-207ENST00000409417 H3BSA7 217 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 J3QW42 95 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 M0R233 179 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 CLPTM1O96005 669 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 ADRA2AP08913 450 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 RPS7P62081 194 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 MBNL2Q5VZF2 373 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 ZBTB49Q6ZSB9 765 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 DPY19L4Q7Z388 723 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 ERI1Q8IV48 349 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 TCEANCQ8N8B7 351 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 SLC25A40Q8TBP6 338 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 TMEM163Q8TC26 289 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 KLF14Q8TD94 323 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 EME1Q96AY2 570 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 COG8Q96MW5 612 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 OR2J1Q9GZK6 312 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 SLCO1C1Q9NYB5 712 aa17.02■□□□□ 0.32
PDLIM2-207ENST00000409417 A0A1W2PPW3 197 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 M0R129 80 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 F12P00748 615 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 GCH1P30793 250 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 NUDT6P53370 316 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 APOFQ13790 326 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 MOGQ16653 247 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 SHFQ7M4L6 423 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 OR6N2Q8NGY6 317 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 ST7LQ8TDW4 575 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 SORCS2Q96PQ0 1159 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 IL4I1Q96RQ9 567 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 TEAD3Q99594 435 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 SLC29A1Q99808 456 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 RAB1BQ9H0U4 201 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 MS4A5Q9H3V2 200 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 GPR160Q9UJ42 338 aa17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 TEP1Q99973 2627 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-207ENST00000409417 F5H5K5 113 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 IGHV3-13P01766 116 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 ALDH3B1P43353 468 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 AADACL4Q5VUY2 407 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 COLCA1Q6ZS62 124 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 SPTSSAQ969W0 71 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 APOBEC3DQ96AK3 386 aaPredicted RBP17■□□□□ 0.31
PDLIM2-207ENST00000409417 SLAMF6Q96DU3 332 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 Q96MF0 132 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 TAAR3PQ9P1P4 343 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 STARD10Q9Y365 291 aa17■□□□□ 0.31
PDLIM2-207ENST00000409417 ERICH4A6NGS2 130 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 SSX4O60224 188 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 ERCC1P07992 297 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 ACSM4P0C7M7 580 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 OTX1P32242 354 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 MPV17P39210 176 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 EIF2B1Q14232 305 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 MAD2L1BPQ15013 274 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 NKPD1Q17RQ9 610 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 CLEC12BQ2HXU8 276 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 LCN1P1Q5VSP4 162 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 NXNL2Q5VZ03 156 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 ZCCHC24Q8N2G6 241 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 ZNF454Q8N9F8 522 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 OR5L1Q8NGL2 311 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 OR8J1Q8NGP2 316 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 HRASLS5Q96KN8 279 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 COPS4Q9BT78 406 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 ABHD6Q9BV23 337 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 C1QTNF5Q9BXJ0 243 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 H2AFY2Q9P0M6 372 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 MTORP42345 2549 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 CCDC182A6NF36 153 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 SELENOFO60613 162 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 ANPEPP15144 967 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 SLC15A1P46059 708 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 TPTEP56180 551 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 CDC42P60953 191 aa16.99■□□□□ 0.31
PDLIM2-207ENST00000409417 RCN1Q15293 331 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms