RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 DHPSP49366 369 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 ATPAF1Q5TC12 328 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 TMEM64Q6YI46 380 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 MDGA2Q7Z553 956 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 BAP18Q8IXM2 172 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 MMABQ96EY8 250 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 OR2A5Q96R48 311 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 CDX2Q99626 313 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 SEMA6CQ9H3T2 930 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 FBXO7Q9Y3I1 522 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 CDC14CA4D256 554 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 APBB3O95704 486 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 TACSTD2P09758 323 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 S100A2P29034 98 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 SLC36A1Q7Z2H8 476 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 OR6N1Q8NGY5 312 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 RNF141Q8WVD5 230 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 PHB2Q99623 299 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 TMPRSS13Q9BYE2 586 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 ELL3Q9HB65 397 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 ZNF223Q9UK11 482 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 IGHV1OR15-9A0A0B4J2B8 117 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 A0A1W2PPC4 97 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 MAOAP21397 527 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 CD38P28907 300 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 FRKP42685 505 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 GRK6P43250 576 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 TSFMP43897 325 aaKnown RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 ARL4DP49703 201 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 ALKBH1Q13686 389 aaKnown RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 LY6G6FQ5SQ64 297 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 KDM8Q8N371 416 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 MFSD9Q8NBP5 474 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.68□□□□□ -0.54
PTPRN-202ENST00000409251 TCTEX1D2Q8WW35 142 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 IER2Q9BTL4 223 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 ANKRD10Q9NXR5 420 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 KCNE5Q9UJ90 142 aa11.68□□□□□ -0.54
PTPRN-202ENST00000409251 A0A1W2PPE2 198 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 C2orf74A8MZ97 194 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 GPR143P51810 404 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 MEP1BQ16820 701 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ZNF529Q6P280 563 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 DGAT2L6Q6ZPD8 337 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 MOB3CQ70IA8 216 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 TMEM151BQ8IW70 566 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ZNF101Q8IZC7 436 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ADAD2Q8NCV1 583 aaKnown RBP11.67□□□□□ -0.54
PTPRN-202ENST00000409251 RCBTB1Q8NDN9 531 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 MARCH1Q8TCQ1 289 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 NECAB3Q96P71 396 aaPredicted RBP11.67□□□□□ -0.54
PTPRN-202ENST00000409251 TRIM2Q9C040 744 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 RNF215Q9Y6U7 377 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 CACNA1GO43497 2377 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 A0A0A6YYH2 397 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 A6NJ64 397 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ASCL1P50553 236 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 OR1D5P58170 312 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 MOGAT2Q3SYC2 334 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ACTBL2Q562R1 376 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ZNF425Q6IV72 752 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 MRGPREQ86SM8 312 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ZNF565Q8N9K5 539 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 OR51A2Q8NGJ7 313 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 SPACA1Q9HBV2 294 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 TAS2R8Q9NYW2 309 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 TINAGQ9UJW2 476 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 RNF222A6NCQ9 220 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 CXorf65A6NEN9 183 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 GPR89AB7ZAQ6 455 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 XRCC3O43542 346 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
PTPRN-202ENST00000409251 PMS2P2O95744 297 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 CT62P0C5K7 136 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 GPR89BP0CG08 455 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 EIF1P41567 113 aaKnown RBP11.67□□□□□ -0.54
PTPRN-202ENST00000409251 INPP5JQ15735 1006 aaPredicted RBP11.67□□□□□ -0.54
PTPRN-202ENST00000409251 OR2B11Q5JQS5 317 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 CDPF1Q6NVV7 123 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 LRP11Q86VZ4 500 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ZNF619Q8N2I2 560 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ZNF563Q8TA94 476 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 GPR148Q8TDV2 347 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 ELOVL3Q9HB03 270 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 CKLFQ9UBR5 152 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 EPHA6Q9UF33 1036 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 KCNG2Q9UJ96 466 aa11.67□□□□□ -0.54
PTPRN-202ENST00000409251 LSM5Q9Y4Y9 91 aaKnown RBP11.67□□□□□ -0.54
PTPRN-202ENST00000409251 MSGN1A6NI15 193 aa11.66□□□□□ -0.54
PTPRN-202ENST00000409251 TAS2R19P59542 299 aa11.66□□□□□ -0.54
PTPRN-202ENST00000409251 ACTBP60709 375 aa11.66□□□□□ -0.54
PTPRN-202ENST00000409251 ACTG1P63261 375 aa11.66□□□□□ -0.54
PTPRN-202ENST00000409251 HABP2Q14520 560 aaPredicted RBP11.66□□□□□ -0.54
PTPRN-202ENST00000409251 CDCP2Q5VXM1 449 aa11.66□□□□□ -0.54
PTPRN-202ENST00000409251 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
PTPRN-202ENST00000409251 OR51F2Q8NH61 342 aa11.66□□□□□ -0.54
PTPRN-202ENST00000409251 SLAMF9Q96A28 289 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms