RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 FTCDNL1E5RQL4 147 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 H7C1C5 153 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 ACOT7O00154 380 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 PIN1P1O15428 100 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 GMFGO60234 142 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 C1QBP02746 253 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 TCRBP04435 133 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 SPARCP09486 303 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 FBXO45P0C2W1 286 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 STOMP27105 288 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 DPP4P27487 766 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 FBXW4P57775 412 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 LCN6P62502 163 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 SSBP1Q04837 148 aaKnown RBP11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 EIF2B1Q14232 305 aaKnown RBP11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 CDK10Q15131 360 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 HES5Q5TA89 166 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 TMEM244Q5VVB8 128 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 CD276Q5ZPR3 534 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 GLT8D1Q68CQ7 371 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 TMEM81Q6P7N7 255 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 OPN5Q6U736 354 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 C16orf47Q6ZP98 133 aaPredicted RBP11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 LINC00696Q6ZRV3 163 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 BTN2A1Q7KYR7 527 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 FCRLAQ7L513 359 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 LINGO2Q7L985 606 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 LUZP2Q86TE4 346 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 OR10H5Q8NGA6 315 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 OR56B4Q8NH76 319 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 GRPEL2Q8TAA5 225 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 ASB10Q8WXI3 467 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 FOXRED1Q96CU9 486 aaPredicted RBP11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 SLCO1C1Q9NYB5 712 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 MYOTQ9UBF9 498 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 KCNG2Q9UJ96 466 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 DHDHQ9UQ10 334 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 RPH3AQ9Y2J0 694 aaPredicted RBP11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 MYO7BQ6PIF6 2116 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 PCNX1Q96RV3 2341 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 A0A1W2PNV4 684 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 DCTN6O00399 190 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 OR2J2O76002 312 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 H2AFB2P0C5Z0 115 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 DCTDP32321 178 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 MLF1P58340 268 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 MADCAM1Q13477 382 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 OR7A5Q15622 319 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 MEP1BQ16820 701 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 SLC36A2Q495M3 483 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 CCDC92Q53HC0 331 aaPredicted RBP11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 ELFN2Q5R3F8 820 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 TMEM69Q5SWH9 247 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 C3orf33Q6P1S2 294 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 LYPD4Q6UWN0 246 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 IGFL3Q6UXB1 125 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 Q6ZS92 163 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 SLC35D2Q76EJ3 337 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 ARMC10Q8N2F6 343 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 OR52N5Q8NH56 324 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 SYNPRQ8TBG9 265 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 HYLS1Q96M11 299 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 GON7Q9BXV9 100 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 RANBP3Q9H6Z4 567 aaPredicted RBP11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 LIN7BQ9HAP6 207 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 ABI3Q9P2A4 366 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 HDGFL3Q9Y3E1 203 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 CSAG2Q9Y5P2 127 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 WIF1Q9Y5W5 379 aa11.47□□□□□ -0.57
SMARCB1-203ENST00000407082 CNTRLQ7Z7A1 2325 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 A0A1B0GVI7 797 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 C7orf66A4D0T2 115 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 MS4A18H0YCH9 400 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 PSMD9O00233 223 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 PLGP00747 810 aaPredicted RBP11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 EDN3P14138 238 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 ACHEP22303 614 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 PTGER4P35408 488 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 GDNFP39905 211 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 SOX2P48431 317 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 HSF1Q00613 529 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 CD83Q01151 205 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 MFAP5Q13361 173 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 RAB11BQ15907 218 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 BCL2A1Q16548 175 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 MS4A18Q3C1V0 323 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 THEM4Q5T1C6 240 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 KLHL24Q6TFL4 600 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 FGD2Q7Z6J4 655 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 LRRTM1Q86UE6 522 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 SIAH3Q8IW03 269 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 UEVLDQ8IX04 471 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 BEST3Q8N1M1 668 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 ASCC1Q8N9N2 400 aaKnown RBP11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 OR4K17Q8NGC6 315 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 RGP1Q92546 391 aaPredicted RBP11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 MCHR2Q969V1 340 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 TMEM106AQ96A25 262 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 ZBTB8AQ96BR9 441 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms