RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TMEM235A6NFC5 223 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 NPIPB13A6NJU9 1138 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 NPIPB4C9JG80 1138 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 IL32P24001 234 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 MPZP25189 248 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 RIDAP52758 137 aaKnown RBP8.76□□□□□ -1.01
MSH2-202ENST00000406134 CFAP77Q6ZQR2 320 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 KRT77Q7Z794 578 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 GVQW1Q8N7I0 195 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 OR6S1Q8NH40 331 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 SSC4DQ8WTU2 575 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 SLC2A8Q9NY64 477 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 MYO7BQ6PIF6 2116 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 IGLV3-12A0A075B6K2 115 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 A0A1B0GX78 115 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 DCDC2BA2VCK2 349 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 RNF222A6NCQ9 220 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 ANKUB1A6NFN9 424 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 LGALS8O00214 317 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 HPP00738 406 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 ATF4P18848 351 aaPredicted RBP8.76□□□□□ -1.01
MSH2-202ENST00000406134 SORDQ00796 357 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 IGSF11Q5DX21 431 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 OR52N4Q8NGI2 321 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 OR6M1Q8NGM8 313 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 OR6K3Q8NGY3 331 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 SCARB1Q8WTV0 552 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 PTX4Q96A99 478 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 GAL3ST1Q99999 423 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 NUDT22Q9BRQ3 303 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 AIFM2Q9BRQ8 373 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 TGIF2Q9GZN2 237 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 PNRC2Q9NPJ4 139 aaKnown RBP8.76□□□□□ -1.01
MSH2-202ENST00000406134 ZNF319Q9P2F9 582 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 CYB5R1Q9UHQ9 305 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 GPR160Q9UJ42 338 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 MRTO4Q9UKD2 239 aaKnown RBP8.76□□□□□ -1.01
MSH2-202ENST00000406134 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 RFPL4AA6NLU0 287 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 RFPL4AL1F8VTS6 287 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 P2RY10O00398 339 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 NUDT14O95848 222 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 ZNF28P17035 718 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 TAS2R19P59542 299 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 FOXF1Q12946 379 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 DHRS2Q13268 280 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 INPP5JQ15735 1006 aaPredicted RBP8.76□□□□□ -1.01
MSH2-202ENST00000406134 JMJD6Q6NYC1 403 aaPredicted RBP8.76□□□□□ -1.01
MSH2-202ENST00000406134 TMEM81Q6P7N7 255 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 ZNF454Q8N9F8 522 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 OR5M8Q8NGP6 311 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 OR13C3Q8NGS6 347 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 KCNK7Q9Y2U2 307 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 PCSK5Q92824 1860 aa8.76□□□□□ -1.01
MSH2-202ENST00000406134 MED12Q93074 2177 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 C5orf63A6NC05 138 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 IL2RAP01589 272 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 RLN1P04808 185 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 BCKDHBP21953 392 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 ACHEP22303 614 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 ZBTB25P24278 435 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 GLO1Q04760 184 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 MFAP5Q13361 173 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 GSG1LQ6UXU4 331 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 SLC51BQ86UW2 128 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 GALNT11Q8NCW6 608 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 TSTD1Q8NFU3 115 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 OR5M9Q8NGP3 310 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 OR2I1PQ8NGU4 316 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 DAZLQ92904 295 aaKnown RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 ANAPC10Q9UM13 185 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 LHFPL6Q9Y693 200 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 URB1O60287 2271 aaKnown RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 FRYQ5TBA9 3013 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 LY6G6EA0A0G2JKS1 128 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 A0A1W2PNV4 684 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 TMEM82A0PJX8 343 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 LIPT2A6NK58 231 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 NUDT21O43809 227 aaKnown RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 SLC25A12O75746 678 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 FAUP35544 74 aaKnown RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 MMP16P51512 607 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 LCN10Q6JVE6 187 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 ANKRD37Q7Z713 158 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 LMAN1LQ9HAT1 526 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 ZNF224Q9NZL3 707 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 U3KQA8 63 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 SIGLEC5O15389 551 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 VSIG8P0DPA2 414 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 RAB6AP20340 208 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 CENPAP49450 140 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 CSNK1EP49674 416 aaKnown RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 SIGLEC14Q08ET2 396 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 BAMBIQ13145 260 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 OR7A5Q15622 319 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 ZNF385CQ66K41 422 aaPredicted RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 OR52W1Q6IF63 320 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 CARFQ8N187 725 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 EIF4E3Q8N5X7 224 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms