RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ASB9Q96DX5 294 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 CERS2Q96G23 380 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 MED8Q96G25 268 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 PLEKHF1Q96S99 279 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 POLR2J2Q9GZM3 115 aaKnown RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 DERL2Q9GZP9 239 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 POLR2J3Q9H1A7 115 aaKnown RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR2AG1Q9H205 316 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 OR51V1Q9H2C8 321 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 GAL3ST2Q9H3Q3 398 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 TRIM45Q9H8W5 580 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 CCDC59Q9P031 241 aaKnown RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 MYEF2Q9P2K5 600 aaKnown RBP3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 ABCD2Q9UBJ2 740 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 CLEC2DQ9UHP7 191 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 NACADO15069 1562 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 NEURL4Q96JN8 1562 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 ABCA7Q8IZY2 2146 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 AGRNO00468 2067 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 PLB1Q6P1J6 1458 aa3.53□□□□□ -1.84
HMGB1P13-201ENST00000406019 A0A0J9YXY3 114 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 GLYATL1P3A0A0U1RQE8 302 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 A0A1B0GUH1 482 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 MBP02144 154 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 APOA1P02647 267 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 KRT16P08779 473 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 GNAO1P09471 354 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 MGMTP16455 207 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 M6PRP20645 277 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 CD82P27701 267 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 PSMB6P28072 239 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR1E1P30953 314 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 FMO3P31513 532 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 TNFSF9P41273 254 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 CDKN2CP42773 168 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 RORCP51449 518 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 NKX2-5P52952 324 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 ATP5J2P56134 94 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 SPCS3P61009 180 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 DYNC1I2Q13409 638 aaKnown RBP3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 MLIPQ5VWP3 458 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 CNIH2Q6PI25 160 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 CMC1Q7Z7K0 106 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 TMEM179BQ7Z7N9 219 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 TAC4Q86UU9 113 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 LINC00612Q8N6U2 182 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 CYB561A3Q8NBI2 242 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR10R2Q8NGX6 335 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR5B3Q8NH48 314 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 OR5K2Q8NHB8 316 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 RAB1CQ92928 201 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 NAT6Q93015 286 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 RPUSD4Q96CM3 377 aaKnown RBP3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 ECSITQ9BQ95 431 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZYG11BQ9C0D3 744 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 NXF3Q9H4D5 531 aaKnown RBP3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 WDR55Q9H6Y2 383 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLC25A22Q9H936 323 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 SIAEQ9HAT2 523 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 UGT1A7Q9HAW7 530 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 UGT1A8Q9HAW9 530 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 MYOZ2Q9NPC6 264 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 GNPTGQ9UJJ9 305 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 CLEC4EQ9ULY5 219 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 VSIG4Q9Y279 399 aa3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 RBMX2Q9Y388 322 aaKnown RBP3.52□□□□□ -1.85
HMGB1P13-201ENST00000406019 ELP1O95163 1332 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 UBN2Q6ZU65 1347 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 A0A1W2PPV4 95 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 A0A1W2PRD5 423 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZFP92A6NM28 416 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 SERPINE3A8MV23 424 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 SMLR1H3BR10 107 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 ITGB1BP1O14713 200 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 BCKDKO14874 412 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 SIVA1O15304 175 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 IFNW1P05000 195 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 CTXN2P0C2S0 81 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 CHTF8P0CG12 524 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZNF250P15622 560 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 PRPS1L1P21108 318 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 NUP107P57740 925 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 SLC25A11Q02978 314 aaKnown RBP3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 ECH1Q13011 328 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 STX5Q13190 355 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 FZD2Q14332 565 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 KIAA0087Q14695 138 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 TRAM2Q15035 370 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZCWPW2Q504Y3 356 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 SPOPLQ6IQ16 392 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 MRPL21Q7Z2W9 205 aaKnown RBP3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 PEX26Q7Z412 305 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 PLCZ1Q86YW0 608 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 CMTM8Q8IZV2 173 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 PNKDQ8N490 385 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 C14orf178Q8N769 122 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 ZNF740Q8NDX6 193 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 NEIL3Q8TAT5 605 aa3.51□□□□□ -1.85
HMGB1P13-201ENST00000406019 ACTL9Q8TC94 416 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms