RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 MKKSQ9NPJ1 570 aaPredicted RBP14.61□□□□□ -0.07
COL4A3BP-204ENST00000405807 WSB2Q9NYS7 404 aaPredicted RBP14.61□□□□□ -0.07
COL4A3BP-204ENST00000405807 TGOLN2O43493 480 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 ADRA2CP18825 462 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 OR10K2Q6IF99 312 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 FAM220AQ7Z4H9 259 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 OR10AD1Q8NGE0 317 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 OR56B1Q8NGI3 324 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 GPR148Q8TDV2 347 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 ARL11Q969Q4 196 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 FAM210BQ96KR6 192 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 ZNF75AQ96N20 296 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 DIRC2Q96SL1 478 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 CDC6Q99741 560 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 NRIP2Q9BQI9 281 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 GLCEO94923 617 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 RPP14O95059 124 aaKnown RBP14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 AKAIN1P0CW23 69 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 IL2RGP31785 369 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 SNRPNP63162 240 aaKnown RBP14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 MEF2DQ14814 521 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 ZNF684Q5T5D7 378 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 LINC00114Q6XXX2 140 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 OR4A4PQ8NGN8 299 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 VWCEQ96DN2 955 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 NMNAT2Q9BZQ4 307 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 WDR13Q9H1Z4 485 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 SEC61A2Q9H9S3 476 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 APMAPQ9HDC9 416 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 DNAH14Q0VDD8 3507 aa14.6□□□□□ -0.07
COL4A3BP-204ENST00000405807 SCN3AQ9NY46 2000 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 A0A0D9SG52 128 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 A0A1B0GVT2 93 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 ARPC3O15145 178 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 TSPAN2O60636 221 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 PNPP00491 289 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 FGF7P21781 194 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 GRPRP30550 384 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 AGTR1P30556 359 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 ACAA2P42765 397 aaKnown RBP14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 SOX2P48431 317 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 TLE4Q04727 773 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 ELAVL1Q15717 326 aaKnown RBP14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 LHFPL4Q7Z7J7 247 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 GCNT2Q8N0V5 402 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 BPIFB2Q8N4F0 458 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 NUBPLQ8TB37 319 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 RXFP3Q9NSD7 469 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 FAM96BQ9Y3D0 163 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 COLEC10Q9Y6Z7 277 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 DNAJB6O75190 326 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 SMIM10L1P0DMW3 83 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 GTF2F2P13984 249 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 EPCAMP16422 314 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 ZNF10P21506 573 aaPredicted RBP14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 NKAIN2Q5VXU1 208 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 ZNF546Q86UE3 836 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 ANGPTL5Q86XS5 388 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 OR4E2Q8NGC2 313 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 RNF166Q96A37 237 aaPredicted RBP14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 SMIM10Q96HG1 83 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 LMF1Q96S06 567 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 EXO5Q9H790 373 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 TRPV4Q9HBA0 871 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 STEAP1Q9UHE8 339 aa14.59□□□□□ -0.07
COL4A3BP-204ENST00000405807 OPN1MWP04001 364 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 OPN1MW2P0DN77 364 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 OPN1MW3P0DN78 364 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 SEC13P55735 322 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 EXOSC7Q15024 291 aaKnown RBP14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 ANKRD16Q6P6B7 361 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 C1orf122Q6ZSJ8 110 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZAR1Q86SH2 424 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 HSD17B11Q8NBQ5 300 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 SGCZQ96LD1 299 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 TMEM185BQ9H7F4 350 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 KIR3DX1Q9H7L2 352 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 DNAJB12Q9NXW2 375 aaKnown RBP14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 CDV3Q9UKY7 258 aaKnown RBP14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 HEBP2Q9Y5Z4 205 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 TMEM272A0A1B0GTI8 110 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 OR5H15A6NDH6 313 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 GGT3PA6NGU5 568 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 OR5H1A6NKK0 313 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 LDB3O75112 727 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 SPARCP09486 303 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 FABP4P15090 132 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 FBXO42Q6P3S6 717 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 NUDT11Q96G61 164 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 Q96M85 177 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 ZNF2Q9BSG1 426 aaPredicted RBP14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 ALG12Q9BV10 488 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 SERINC1Q9NRX5 453 aa14.58□□□□□ -0.08
COL4A3BP-204ENST00000405807 TRBV5-5A0A0J9YX44 114 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 LNP1A1A4G5 178 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 HIDE1A8MVS5 230 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 PRR32B1ATL7 298 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 MAS1P04201 325 aa14.57□□□□□ -0.08
COL4A3BP-204ENST00000405807 APLNRP35414 380 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms