RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 THEM6Q8WUY1 208 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 SNX33Q8WV41 574 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 RNF133Q8WVZ7 376 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 NRG4Q8WWG1 115 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 MYDGFQ969H8 173 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 FBXW5Q969U6 566 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 APOBEC3DQ96AK3 386 aaPredicted RBP7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 SLAMF6Q96DU3 332 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 FBXO17Q96EF6 278 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 RNFT2Q96EX2 444 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 PIK3IP1Q96FE7 263 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 YTHDF1Q9BYJ9 559 aaKnown RBP7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 CLEC4MQ9H2X3 399 aaPredicted RBP7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 RGCCQ9H4X1 137 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 ZNF442Q9H7R0 627 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 MED20Q9H944 212 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 EMC7Q9NPA0 242 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 PLCXD1Q9NUJ7 323 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 TBCCD1Q9NVR7 557 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 MRPS18AQ9NVS2 196 aaKnown RBP7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 MRPL22Q9NWU5 206 aaKnown RBP7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 DNAJC27Q9NZQ0 273 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 EXOSC1Q9Y3B2 195 aaKnown RBP7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 LHFPL6Q9Y693 200 aa7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 USP9YO00507 2555 aaPredicted RBP7.28□□□□□ -1.24
SNRPD3-203ENST00000404603 HCFC1P51610 2035 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 CACNA1CQ13936 2221 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 IGHV2OR16-5A0A0B4J2B6 119 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 IGHV1-18A0A0C4DH31 117 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 DAPL1A0PJW8 107 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 TVP23AA6NH52 213 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 FAM171A2A8MVW0 826 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 C19orf84I3L1E1 186 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 M0R135 149 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 DLGAP1O14490 977 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 RER1O15258 196 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 XRCC2O43543 280 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 DENRO43583 198 aaKnown RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 SYNGR3O43761 229 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ENTPD6O75354 484 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 THBDP07204 575 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 CLUP10909 449 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 DBTP11182 482 aaKnown RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ZNF12P17014 697 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 GABRB1P18505 474 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ALOX5APP20292 161 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 GCH1P30793 250 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 GLRXP35754 106 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 NAA10P41227 235 aaPredicted RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 SLC6A9P48067 706 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 EVX1P49640 407 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 FOXG1P55316 489 aaPredicted RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ROM1Q03395 351 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ZNF91Q05481 1191 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 RAB39AQ14964 217 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 RBM48Q5RL73 367 aaKnown RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 C6orf52Q5T4I8 152 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 AGAP6Q5VW22 663 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ZNF322Q6U7Q0 402 aaPredicted RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ZNF704Q6ZNC4 412 aaPredicted RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 CDC20BQ86Y33 519 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 WDFY1Q8IWB7 410 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ZNF679Q8IYX0 411 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 FBXL14Q8N1E6 418 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 CCDC54Q8NEL0 328 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 OR10H4Q8NGA5 316 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ZNF799Q96GE5 643 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 C4orf45Q96LM5 186 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 KCNJ15Q99712 375 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ABHD6Q9BV23 337 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 JAM3Q9BX67 310 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 WNT5BQ9H1J7 359 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ADGRL4Q9HBW9 690 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 CYSLTR2Q9NS75 346 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 SLCO1C1Q9NYB5 712 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ZNF224Q9NZL3 707 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 IKZF2Q9UKS7 526 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 EXOGQ9Y2C4 368 aaKnown RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 CMAHPQ9Y471 501 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 SPTAN1Q13813 2472 aaKnown RBP7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 ADGRG4Q8IZF6 3080 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 PCNX1Q96RV3 2341 aa7.27□□□□□ -1.25
SNRPD3-203ENST00000404603 DOPEY2Q9Y3R5 2298 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 A0A1W2PR80 420 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 FAM221AA4D161 298 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 CCDC182A6NF36 153 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 DEFB108AA8MXU0 73 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 HS3ST1O14792 307 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 SELENOFO60613 162 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 FAM20BO75063 409 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 MTRF1O75570 445 aaKnown RBP7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 CTAG2O75638 210 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 CCNOP22674 350 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 NR4A1P22736 598 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 APEX1P27695 318 aaKnown RBP7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 APOBEC3AP31941 199 aaPredicted RBP7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 OTX1P32242 354 aaPredicted RBP7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 TAS2R43P59537 309 aa7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 PSMA6P60900 246 aaKnown RBP7.26□□□□□ -1.25
SNRPD3-203ENST00000404603 CDK5R2Q13319 367 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms