RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PTTG3PQ9NZH4 202 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SLC13A4Q9UKG4 626 aa9.81□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TENM2Q9NT68 2774 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 NPIPB13A6NJU9 1138 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 NPIPB4C9JG80 1138 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 H7C1C5 153 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SURF4O15260 269 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ENSAO43768 121 aaKnown RBP9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SERPINB7O75635 380 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TOX4O94842 621 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 HLA-DPB1P04440 258 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 COX5BP10606 129 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 RAC2P15153 192 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 HTR5AP47898 357 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DLX1P56177 255 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LOXL3P58215 753 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LCN6P62502 163 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ELF3P78545 371 aaPredicted RBP9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MPPED2Q15777 294 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CCDC92Q53HC0 331 aaPredicted RBP9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SLC30A8Q8IWU4 369 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 KIRREL3Q8IZU9 778 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 C11orf44Q8N8P7 122 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OR8G5Q8NG78 346 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SGTBQ96EQ0 304 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MPP4Q96JB8 637 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LYSTQ99698 3801 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PAIP2Q9BPZ3 127 aaKnown RBP9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ALG12Q9BV10 488 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TOR3AQ9H497 397 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 THAP1Q9NVV9 213 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 NDRG4Q9ULP0 352 aaKnown RBP9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 FOXJ3Q9UPW0 622 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DNAH1Q9P2D7 4330 aa9.8□□□□□ -0.84
SPTLC1P3-201ENST00000403408 A0A1W2PPL8 197 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OR6C6A6NF89 314 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 IFNL4K9M1U5 179 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 IMPA2O14732 288 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DOK2O60496 412 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SHOX2O60902 331 aaPredicted RBP9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MSR1P21757 451 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 MRPL19P49406 292 aaKnown RBP9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 RAD23AP54725 363 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ARF6P62330 175 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 GUCY1A3Q02108 690 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 RSPO1Q2MKA7 263 aaPredicted RBP9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 KRT71Q3SY84 523 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TTMPQ5BVD1 217 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 VAX1Q5SQQ9 334 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PRAMEF6Q5VXH4 476 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SLC35E4Q6ICL7 350 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 FBXW12Q6X9E4 464 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DCDC5Q6ZRR9 648 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PPP1R35Q8TAP8 253 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SPDL1Q96EA4 605 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 EVA1AQ9H8M9 152 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 WDR76Q9H967 626 aa9.79□□□□□ -0.84
SPTLC1P3-201ENST00000403408 A0A1B0GW55 424 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 GPR37O15354 613 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 FAM20BO75063 409 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DUX4L2P0CJ85 424 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DUX4L3P0CJ86 424 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DUX4L4P0CJ87 422 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DUX4L5P0CJ88 424 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DUX4L6P0CJ89 424 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DUX4L7P0CJ90 424 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ZNF26P17031 533 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ANOS1P23352 680 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 GZMMP51124 257 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 RPL27P61353 136 aaKnown RBP9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 PCBD1P61457 104 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DUX4L9Q6RFH8 374 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CCBE1Q6UXH8 406 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 NLRC3Q7RTR2 1065 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 REC114Q7Z4M0 266 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 SYT9Q86SS6 491 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LYG1Q8N1E2 194 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ANKRD42Q8N9B4 389 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 BHLHE23Q8NDY6 225 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 OR13G1Q8NGZ3 307 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 Q8TCH9 128 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LRRC8CQ8TDW0 803 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 CFHR4Q92496 578 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TECTBQ96PL2 329 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 TRIM15Q9C019 465 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 KCNK9Q9NPC2 374 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 ZNRD1Q9P1U0 126 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 DUX4Q9UBX2 424 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 HIF3AQ9Y2N7 669 aa9.78□□□□□ -0.84
SPTLC1P3-201ENST00000403408 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.84
SPTLC1P3-201ENST00000403408 LOC100653049A0A140TA62 436 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 C12orf71A8MTZ7 269 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 IQCF6A8MYZ5 107 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 FBP2O00757 339 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RGS16O15492 202 aaPredicted RBP9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SGCEO43556 437 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 OR10H3O60404 316 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 KRT34O76011 436 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 IGF2P01344 180 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms