RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 NDUFA2O43678 99 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 PLGP00747 810 aaPredicted RBP17.74■□□□□ 0.43
CCDC47-202ENST00000403162 IGHMP01871 453 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 HLA-AP01891 365 aaKnown RBP17.74■□□□□ 0.43
CCDC47-202ENST00000403162 CTLA4P16410 223 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 MPZP25189 248 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 LUMP51884 338 aaPredicted RBP17.74■□□□□ 0.43
CCDC47-202ENST00000403162 NUBP1P53384 320 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 C1orf100Q5SVJ3 147 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 OR52N5Q8NH56 324 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 PMEPA1Q969W9 287 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 ZBTB8AQ96BR9 441 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 LRRC46Q96FV0 321 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 CMKLR1Q99788 373 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 VRK1Q99986 396 aaPredicted RBP17.74■□□□□ 0.43
CCDC47-202ENST00000403162 HHLA2Q9UM44 414 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 LAMA1P25391 3075 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 ALPK2Q86TB3 2170 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 CACNA1EQ15878 2313 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 H0YIG0 161 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 SLC25A12O75746 678 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 GP1BAP07359 652 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 ZNF28P17035 718 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 RAB6AP20340 208 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 ZBTB25P24278 435 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 MOGAT2Q3SYC2 334 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 SCGB2B2Q4G0G5 96 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 POMZP3Q6PJE2 187 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 ACOT7LQ6ZUV0 252 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 SLC25A42Q86VD7 318 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 ZNF584Q8IVC4 421 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 CLRN3Q8NCR9 226 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 OR51A2Q8NGJ7 313 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 ADIPOR1Q96A54 375 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 PRRT1Q99946 306 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 PDCD10Q9BUL8 212 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 NUDT9Q9BW91 350 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 ZNF416Q9BWM5 594 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 GAREM1Q9H706 876 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 PNO1Q9NRX1 252 aaKnown RBP17.74■□□□□ 0.43
CCDC47-202ENST00000403162 VSIG4Q9Y279 399 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 R4GMQ9 66 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 OR14I1A6ND48 311 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 DXOO77932 396 aaKnown RBP17.73■□□□□ 0.43
CCDC47-202ENST00000403162 CAPZA1P52907 286 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 C17orf107Q6ZR85 190 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 LYG2Q86SG7 212 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 LYPD6Q86Y78 171 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 OR13C3Q8NGS6 347 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 AQP3Q92482 292 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 SLC25A36Q96CQ1 311 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 DNAJA3Q96EY1 480 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 GAL3ST1Q99999 423 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 ARRDC1-AS1Q9H2J1 176 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 SMOC1Q9H4F8 434 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 LANCL2Q9NS86 450 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 FARSAQ9Y285 508 aaKnown RBP17.73■□□□□ 0.43
CCDC47-202ENST00000403162 VPS13AQ96RL7 3174 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 A0A1W2PQD3 144 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 DCDC2BA2VCK2 349 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 ABCD4O14678 606 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 GMFGO60234 142 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 IL2RAP01589 272 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 IGKV3-11P04433 115 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 ISG15P05161 165 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 RAB3AP20336 220 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 CD1CP29017 333 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 EPHA8P29322 1005 aaPredicted RBP17.73■□□□□ 0.43
CCDC47-202ENST00000403162 MPLP40238 635 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 DNASE1L1P49184 302 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 TAF13Q15543 124 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 KIF26BQ2KJY2 2108 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 SLC23A3Q6PIS1 610 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 OR2W3Q7Z3T1 314 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 MDGA2Q7Z553 956 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 PRR22Q8IZ63 422 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 NKAIN3Q8N8D7 197 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 BPIFCQ8NFQ6 507 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 PPP1R1CQ8WVI7 109 aa17.73■□□□□ 0.43
CCDC47-202ENST00000403162 TMEM235A6NFC5 223 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 NPIPB7O75200 414 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 GP1BBP13224 206 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 PGCP20142 388 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 DLSTP36957 453 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 MC2RQ01718 297 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 ELP2Q6IA86 826 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 RAB12Q6IQ22 244 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 OGFOD3Q6PK18 319 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 UQCC3Q6UW78 93 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 TMEM151BQ8IW70 566 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 CCDC36Q8IYA8 594 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 JAGN1Q8N5M9 183 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 ZDHHC22Q8N966 263 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 OR5T2Q8NGG2 359 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 OR2I1PQ8NGU4 316 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 OR10Z1Q8NGY1 313 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 LOXL4Q96JB6 756 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 ZNF75AQ96N20 296 aa17.72■□□□□ 0.43
CCDC47-202ENST00000403162 ZNF471Q9BX82 626 aaPredicted RBP17.72■□□□□ 0.43
CCDC47-202ENST00000403162 OR8D2Q9GZM6 311 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms