RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 SLC35D1Q9NTN3 355 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 OR6C68A6NDL8 312 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 SERINC4A6NH21 518 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 M0R082 166 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 SUSD5O60279 629 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 CA3P07451 260 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 NAT1P18440 290 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 SDHBP21912 280 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 CLDN17P56750 224 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 PMPCAQ10713 525 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR8B8Q15620 311 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 MFSD12Q6NUT3 480 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 H2BFWTQ7Z2G1 175 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ADGRE4PQ86SQ3 457 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 GJC3Q8NFK1 279 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR6K3Q8NGY3 331 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 PHOSPHO2Q8TCD6 241 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 LIPHQ8WWY8 451 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 EXOSC3Q9NQT5 275 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 MRPL22Q9NWU5 206 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 KIAA1456Q9P272 454 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 TMEFF2Q9UIK5 374 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 TMEM235A6NFC5 223 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 RRP8O43159 456 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR2F2O95006 317 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 NXPH3O95157 252 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 RPA2P15927 270 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 DCTDP32321 178 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR2F1Q13607 317 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 TPBGQ13641 420 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 TBC1D28Q2M2D7 210 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 DPY19L2P2Q6ZN68 376 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ACOT7LQ6ZUV0 252 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ANGPTL5Q86XS5 388 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 NAXDQ8IW45 347 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 MFSD4AQ8N468 514 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ZFPM2Q8WW38 1151 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 H1FXQ92522 213 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 WDR89Q96FK6 387 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 RYDENQ9NUL5 291 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 PIGLQ9Y2B2 252 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 STRAPQ9Y3F4 350 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 KNTC1P50748 2209 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 HSPB6O14558 160 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF354AO60765 605 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR2C1O95371 312 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 TPOP07202 933 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 PRR35P0CG20 571 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 EPHA5P54756 1037 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 RANP62826 216 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ADIPOR2Q86V24 386 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 MFSD9Q8NBP5 474 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR2AK2Q8NG84 335 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR13C8Q8NGS7 320 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 MED9Q9NWA0 146 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 PISDQ9UG56 409 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 POLDIP2Q9Y2S7 368 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 CBY1Q9Y3M2 126 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 HMGN4O00479 90 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 PLRG1O43660 514 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 MT-ATP6P00846 226 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 RPS27P42677 84 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 EDDM3BP56851 147 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 LTC4SQ16873 150 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 LYRM7Q5U5X0 104 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF425Q6IV72 752 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 SLC48A1Q6P1K1 146 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF813Q6ZN06 617 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF620Q6ZNG0 422 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR1M1Q8NGA1 313 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 OR52B4Q8NGK2 314 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 C11orf40Q8WZ69 217 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 MRPL38Q96DV4 380 aaKnown RBP8.1□□□□□ -1.11
PTPRM-202ENST00000400053 GAREM1Q9H706 876 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 KLK11Q9UBX7 282 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 LY75O60449 1722 aa8.1□□□□□ -1.11
PTPRM-202ENST00000400053 DCTN6O00399 190 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 VAMP5O95183 116 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 H2AFB1P0C5Y9 115 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 PI3P19957 117 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 AKR1C3P42330 323 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 BPIFB3P59826 476 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 RAB1AP62820 205 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 GABREP78334 506 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 DEFB133Q30KQ1 61 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 ABHD17CQ6PCB6 329 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 ADAMTSL4Q6UY14 1074 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 OR10G3Q8NGC4 313 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 BCL7CQ8WUZ0 217 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-202ENST00000400053 PLK3Q9H4B4 646 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 BANF2Q9H503 90 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 NARFLQ9H6Q4 476 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 LRIT1Q9P2V4 623 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 LAMP3Q9UQV4 416 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 PRAMEF25A6NGN4 478 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF724A8MTY0 619 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 FCMRO60667 390 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 JTBO76095 146 aa8.09□□□□□ -1.11
PTPRM-202ENST00000400053 ACSM4P0C7M7 580 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms