RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MRPS18AQ9NVS2 196 aaKnown RBP10.27□□□□□ -0.76
SKA3-203ENST00000400018 ABCA4P78363 2273 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 OR3A3P47888 321 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 ARF1P84077 181 aaKnown RBP10.27□□□□□ -0.77
SKA3-203ENST00000400018 PMPCAQ10713 525 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 ACSF3Q4G176 576 aaPredicted RBP10.27□□□□□ -0.77
SKA3-203ENST00000400018 ZNF774Q6NX45 483 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 SLC16A9Q7RTY1 509 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 MYPOPQ86VE0 399 aaPredicted RBP10.27□□□□□ -0.77
SKA3-203ENST00000400018 P2RY8Q86VZ1 359 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 SKA3Q8IX90 412 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 POC5Q8NA72 575 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 OR6S1Q8NH40 331 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 OTOSQ8NHW6 89 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 NABP1Q96AH0 204 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 GPR35Q9HC97 309 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 ZNF319Q9P2F9 582 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 ZNF221Q9UK13 617 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 EMC9Q9Y3B6 208 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 LRP12Q9Y561 859 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 A0A0X1KG70 313 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 ACOD1A6NK06 481 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 AIREO43918 545 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 YES1P07947 543 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 BMP5P22003 454 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 HGFACQ04756 655 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 HIST3H3Q16695 136 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 ATAD3CQ5T2N8 411 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 C22orf34Q6ZV56 151 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 C20orf196Q8IYI0 205 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 PRSS35Q8N3Z0 413 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 POMGNT2Q8NAT1 580 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 OR10H5Q8NGA6 315 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 S100ZQ8WXG8 99 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 PNPLA2Q96AD5 504 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 CCDC120Q96HB5 630 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 PAQR5Q9NXK6 330 aaPredicted RBP10.27□□□□□ -0.77
SKA3-203ENST00000400018 KLHL9Q9P2J3 617 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 GDF2Q9UK05 429 aaPredicted RBP10.27□□□□□ -0.77
SKA3-203ENST00000400018 PCDHGB1Q9Y5G3 927 aa10.27□□□□□ -0.77
SKA3-203ENST00000400018 A0A0G2JMP0 313 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 A6NIZ1 184 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 AGFG2O95081 481 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 CPN1P15169 458 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 JUNBP17275 347 aaPredicted RBP10.26□□□□□ -0.77
SKA3-203ENST00000400018 CRABP1P29762 137 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 HTR2BP41595 481 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 KIR2DL2P43627 348 aaPredicted RBP10.26□□□□□ -0.77
SKA3-203ENST00000400018 TDGF1P3P51864 188 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 RAP1BP61224 184 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 RAP1AP62834 184 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 CSNK2BP67870 215 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 ENDOGQ14249 297 aaKnown RBP10.26□□□□□ -0.77
SKA3-203ENST00000400018 THEM4Q5T1C6 240 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 PDSS1Q5T2R2 415 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 ZNF813Q6ZN06 617 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 KRT77Q7Z794 578 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 ST7LQ8TDW4 575 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 GHSRQ92847 366 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 PRDM14Q9GZV8 571 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 SLC25A18Q9H1K4 315 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 PPP1R3EQ9H7J1 279 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 RNF122Q9H9V4 155 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 BABAM2Q9NXR7 383 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 FRRS1LQ9P0K9 344 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 CLCF1Q9UBD9 225 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 UPB1Q9UBR1 384 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 TRIM77I1YAP6 450 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 ZFPL1O95159 310 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 CELA3BP08861 270 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 OR2T7P0C7T2 308 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 CD40LGP29965 261 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 DOLPP1Q86YN1 238 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 LINC00469Q8N7U9 141 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 ZNF610Q8N9Z0 462 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 OR2T27Q8NH04 317 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 RGP1Q92546 391 aaPredicted RBP10.26□□□□□ -0.77
SKA3-203ENST00000400018 TMEM54Q969K7 222 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 APH1AQ96BI3 265 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 TTYH2Q9BSA4 534 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 SLCO5A1Q9H2Y9 848 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 FANCFQ9NPI8 374 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
SKA3-203ENST00000400018 EXOSC1Q9Y3B2 195 aaKnown RBP10.26□□□□□ -0.77
SKA3-203ENST00000400018 HEATR1Q9H583 2144 aaKnown RBP10.26□□□□□ -0.77
SKA3-203ENST00000400018 TRBV2A0A0J9YWF9 115 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ATP6V1G2-DDX39BF2Z307 99 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 AQP7O14520 342 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 SLC43A1O75387 559 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 CD79AP11912 226 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 ATF4P18848 351 aaPredicted RBP10.25□□□□□ -0.77
SKA3-203ENST00000400018 CRYBB2P43320 205 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 B2MP61769 119 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 TAGLNQ01995 201 aaKnown RBP10.25□□□□□ -0.77
SKA3-203ENST00000400018 GGTLC2Q14390 218 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 CDSNQ15517 529 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 EIF2S3LQ2VIR3 472 aaKnown RBP10.25□□□□□ -0.77
SKA3-203ENST00000400018 Q5BKY6 102 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 LCN1P1Q5VSP4 162 aa10.25□□□□□ -0.77
SKA3-203ENST00000400018 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms