RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 MRPL43Q8N983 215 aaKnown RBP12.29□□□□□ -0.44
LDLRAD4-203ENST00000399848 JAM3Q9BX67 310 aa12.29□□□□□ -0.44
LDLRAD4-203ENST00000399848 ARL2-SNX15V9GYD0 113 aa12.29□□□□□ -0.44
LDLRAD4-203ENST00000399848 SLC5A10A0PJK1 596 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 NANOGP1Q8N7R0 232 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 HRH3Q9Y5N1 445 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 SERTM2A0A1B0GWG4 89 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 CD1EP15812 388 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 CDK5Q00535 292 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 EGR3Q06889 387 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 PIGTQ969N2 578 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 TM4SF18Q96CE8 201 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 KIF26BQ2KJY2 2108 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 ZNF816-ZNF321PA0A0X1KG74 233 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 ZNF727A8MUV8 499 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 CTNSO60931 367 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 ZNF485Q8NCK3 441 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 C11orf40Q8WZ69 217 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 NIPSNAP1Q9BPW8 284 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 PSMB6P28072 239 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 OR51H1Q8NH63 302 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 EIF4E2O60573 245 aaKnown RBP12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 ALOX5APP20292 161 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 HSF1Q00613 529 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 ARSGQ96EG1 525 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 A0A1B0GX78 115 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 RAB27BO00194 218 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 TSPAN12O95859 305 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 SLC24A4Q8NFF2 622 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 MED18Q9BUE0 208 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 CLEC2DQ9UHP7 191 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 ZNF26P17031 533 aaPredicted RBP12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 PDZD11Q5EBL8 140 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 MFSD12Q6NUT3 480 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 SLC38A9Q8NBW4 561 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 PFN4Q8NHR9 129 aa12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 PCNPQ8WW12 178 aaKnown RBP12.28□□□□□ -0.44
LDLRAD4-203ENST00000399848 CACNA1DQ01668 2161 aa12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 NID1P14543 1247 aa12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 AGFG2O95081 481 aa12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 VAMP5O95183 116 aa12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 SSBP1Q04837 148 aaKnown RBP12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 VAMP3Q15836 100 aa12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 GFRALQ6UXV0 394 aa12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 ZNF573Q86YE8 665 aa12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 TRIB1Q96RU8 372 aa12.27□□□□□ -0.44
LDLRAD4-203ENST00000399848 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 PIGAP37287 484 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 TMEM211Q6ICI0 200 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 ARR3P36575 388 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 PLAC9Q5JTB6 97 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 MORN1Q5T089 497 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 DUSP22Q9NRW4 184 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 ZNF629Q9UEG4 869 aaPredicted RBP12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 OR7C2O60412 319 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 SSX7Q7RTT5 188 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 ARFGAP1Q8N6T3 406 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 RAB18Q9NP72 206 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 CHST11Q9NPF2 352 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 FBXO4Q9UKT5 387 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 ARPC3O15145 178 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 ELAVL1Q15717 326 aaKnown RBP12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 AGBL4Q5VU57 503 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 CPEB2Q7Z5Q1 589 aaKnown RBP12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 ISL2Q96A47 359 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 FBXO8Q9NRD0 319 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 TCTE3Q8IZS6 198 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 ZNF511Q8NB15 262 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 OR10P1Q8NGE3 313 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 OR51F2Q8NH61 342 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 SHISA4Q96DD7 197 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 OPALINQ96PE5 141 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 S1PR3Q99500 378 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 PLEKHA2Q9HB19 425 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 NTNG1Q9Y2I2 539 aa12.27□□□□□ -0.45
LDLRAD4-203ENST00000399848 GFRA2O00451 464 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 GJB3O75712 270 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 CALCRP30988 508 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 SRP9P49458 86 aaKnown RBP12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 P2RX3P56373 397 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 PRTGQ2VWP7 1150 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 TSEN54Q7Z6J9 526 aaKnown RBP12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 ARRDC2Q8TBH0 407 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 C12orf10Q9HB07 376 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 CYC1P08574 325 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 GPX2P18283 190 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 RPS19P39019 145 aaKnown RBP12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 OR10A3P58181 314 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 PGBD5Q8N414 524 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 DLL1O00548 723 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 RNF212Q495C1 297 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 SPANXN5Q5MJ07 72 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 LANCL2Q9NS86 450 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 A0A0A6YYJ9 748 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 POU2F2P09086 479 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 DGAT2L6Q6ZPD8 337 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 TMEFF1Q8IYR6 380 aa12.26□□□□□ -0.45
LDLRAD4-203ENST00000399848 TMEM174Q8WUU8 243 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms