RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CLPTM1O96005 669 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 ZNF250P15622 560 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 EVX1P49640 407 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 PPOXP50336 477 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 KLF3P57682 345 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 PPP1CBP62140 327 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 ECH1Q13011 328 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 ZIK1Q3SY52 487 aaPredicted RBP18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 ZBTB49Q6ZSB9 765 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 TIGD4Q8IY51 512 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 SYNPRQ8TBG9 265 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 SLC25A40Q8TBP6 338 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 TMEM163Q8TC26 289 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 IL4I1Q96RQ9 567 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 DCLRE1CQ96SD1 692 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 SLC29A1Q99808 456 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 TBCCD1Q9NVR7 557 aa18.19■□□□□ 0.5
TSPAN4-206ENST00000397408 SELENOFO60613 162 aa18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 SELENOVP59797 346 aa18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 MAD2L1BPQ15013 274 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 PRSS57Q6UWY2 283 aa18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 DPY19L4Q7Z388 723 aa18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 BCDIN3DQ7Z5W3 292 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 MARS2Q96GW9 593 aaKnown RBP18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 SORCS2Q96PQ0 1159 aa18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 VRK1Q99986 396 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 OR2J1Q9GZK6 312 aa18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 BARX1Q9HBU1 254 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 FBXO9Q9UK97 447 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 F8P00451 2351 aa18.18■□□□□ 0.5
TSPAN4-206ENST00000397408 IGLV3-9A0A075B6K5 115 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 CCDC182A6NF36 153 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 F5H5K5 113 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 M0R233 179 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 ANPEPP15144 967 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 MPV17P39210 176 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 NAA10P41227 235 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 ALDH3B1P43353 468 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 RGS6P49758 472 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 EFNB1P98172 346 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 EIF2B1Q14232 305 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 RSPO1Q2MKA7 263 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 KRTAP27-1Q3LI81 207 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 ZNF718Q3SXZ3 478 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 LCN1P1Q5VSP4 162 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 C1orf174Q8IYL3 243 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 ST7LQ8TDW4 575 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 SLAMF6Q96DU3 332 aa18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 DDX28Q9NUL7 540 aaKnown RBP18.17■□□□□ 0.5
TSPAN4-206ENST00000397408 ADRA2AP08913 450 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 GCH1P30793 250 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 NUDT6P53370 316 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 TRIP10Q15642 601 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 NKPD1Q17RQ9 610 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 ALKBH6Q3KRA9 238 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 AADACL4Q5VUY2 407 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 SPATC1Q76KD6 591 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 SHFQ7M4L6 423 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 TGIF2LYQ8IUE0 185 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 ZCCHC24Q8N2G6 241 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 FAM81AQ8TBF8 368 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 KLF14Q8TD94 323 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 IPCEF1Q8WWN9 437 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 Q96MF0 132 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 MBOAT4Q96T53 435 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 COPS4Q9BT78 406 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 POFUT1Q9H488 388 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 TOR3AQ9H497 397 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 CENPMQ9NSP4 180 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 TAAR3PQ9P1P4 343 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 HIVEP1P15822 2718 aa18.16■□□□□ 0.5
TSPAN4-206ENST00000397408 ZNF878C9JN71 531 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 SSX4O60224 188 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 ACSM4P0C7M7 580 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 CDC42P60953 191 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 NXNL2Q5VZ03 156 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 MBNL2Q5VZF2 373 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 SPTSSAQ969W0 71 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 TEAD3Q99594 435 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 TPK1Q9H3S4 243 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 H2AFY2Q9P0M6 372 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 STARD10Q9Y365 291 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 VPS13CQ709C8 3753 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 FLNAP21333 2647 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 H3BSA7 217 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 J3QW42 95 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 M0R135 149 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 LY6HO94772 140 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 MRPL3P09001 348 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 EFNA4P52798 201 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 ELF3P78545 371 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 TAF13Q15543 124 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 TMEM255AQ5JRV8 349 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 OR8J1Q8NGP2 316 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 OTOSQ8NHW6 89 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 APOBEC3DQ96AK3 386 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 ZNF799Q96GE5 643 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 HRASLS5Q96KN8 279 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 COG8Q96MW5 612 aa18.15■□□□□ 0.5
TSPAN4-206ENST00000397408 AMELYQ99218 206 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms