RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 KCNG2Q9UJ96 466 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 SH3BGRL2Q9UJC5 107 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 TINAGQ9UJW2 476 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 FAM215AQ9Y5M1 114 aa13.16□□□□□ -0.3
CAPN3-207ENST00000397200 IGKV3D-15A0A087WSY6 115 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 TMEM212A6NML5 194 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 B8ZZF3 427 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 SLC16A7O60669 478 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF254O75437 659 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF432O94892 652 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 SLC2A2P11168 524 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-207ENST00000397200 MAPK3P27361 379 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-207ENST00000397200 IL18Q14116 193 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 Q499Y3 187 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 TEX30Q5JUR7 227 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 OR2A2Q6IF42 318 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 DNM1P34Q6PK57 102 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 C3P1Q6ZMU1 363 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 C9orf106Q8NAJ2 232 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-207ENST00000397200 GFI1Q99684 422 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 C11orf54Q9H0W9 315 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-207ENST00000397200 GP6Q9HCN6 339 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 GLRX2Q9NS18 164 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 MED29Q9NX70 200 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 NPAP1Q9NZP6 1156 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 ING1Q9UK53 422 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-207ENST00000397200 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 FLVCR1Q9Y5Y0 555 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 MED12LQ86YW9 2145 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 DOCK7Q96N67 2140 aa13.15□□□□□ -0.3
CAPN3-207ENST00000397200 ZFYVE26Q68DK2 2539 aa13.15□□□□□ -0.31
CAPN3-207ENST00000397200 TRBV5-7A0A0A0MS05 114 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 MBD3L4A6NDZ8 208 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-207ENST00000397200 MBD3L3A6NE82 208 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-207ENST00000397200 MBD3L5A6NJ08 208 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF724A8MTY0 619 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 FAM25AB3EWG3 89 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 FAM25CB3EWG5 89 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 FAM25GB3EWG6 89 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF593O00488 134 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-207ENST00000397200 PDCD5O14737 125 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 YES1P07947 543 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 SRMP19623 302 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 CCR9P51686 369 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 BIDP55957 195 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 PER3P56645 1201 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 CLDN17P56750 224 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 TLE1Q04724 770 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 TAB1Q15750 504 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 SLC18B1Q6NT16 456 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 SPATC1Q76KD6 591 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 HDDC2Q7Z4H3 204 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 WDFY1Q8IWB7 410 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF679Q8IYX0 411 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 RDH10Q8IZV5 341 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 SAMD12Q8N8I0 201 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 OR5AK2Q8NH90 309 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 MBD3L2Q8NHZ7 208 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-207ENST00000397200 THRSPQ92748 146 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 TRIM63Q969Q1 353 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 GMPPAQ96IJ6 420 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF385AQ96PM9 386 aaKnown RBP13.14□□□□□ -0.31
CAPN3-207ENST00000397200 NEDD4LQ96PU5 975 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 BCO1Q9HAY6 547 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 SLCO1C1Q9NYB5 712 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 MALT1Q9UDY8 824 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 IKZF2Q9UKS7 526 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 SPATA2Q9UM82 520 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 KALRNO60229 2985 aa13.14□□□□□ -0.31
CAPN3-207ENST00000397200 PHF3Q92576 2039 aaKnown RBP13.14□□□□□ -0.31
CAPN3-207ENST00000397200 TRGV8A0A0C4DH27 118 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 A0A0G2JMP0 313 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 A0A0X1KG70 313 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 ACOD1A6NK06 481 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF726A6NNF4 738 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 RPP14O95059 124 aaKnown RBP13.13□□□□□ -0.31
CAPN3-207ENST00000397200 PAHP00439 452 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 RAF1P04049 648 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 CFPP27918 469 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 TALDO1P37837 337 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 RPS27P42677 84 aaKnown RBP13.13□□□□□ -0.31
CAPN3-207ENST00000397200 NR4A2P43354 598 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 KIR3DL2P43630 455 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 GLO1Q04760 184 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 CD300CQ08708 224 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 ETFDHQ16134 617 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 TRIQKQ629K1 86 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 PRSS35Q8N3Z0 413 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 ZNF843Q8N446 348 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 RPRMLQ8N4K4 120 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 OR4M2Q8NGB6 313 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 THEM6Q8WUY1 208 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 EMC6Q9BV81 110 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 OSGIN2Q9Y236 505 aa13.13□□□□□ -0.31
CAPN3-207ENST00000397200 NOSIPQ9Y314 301 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms