RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 WDFY2Q96P53 400 aa12.4□□□□□ -0.42
SEC13-206ENST00000397102 DPAGT1Q9H3H5 408 aa12.4□□□□□ -0.42
SEC13-206ENST00000397102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.4□□□□□ -0.42
SEC13-206ENST00000397102 CCDC167Q9P0B6 97 aa12.4□□□□□ -0.42
SEC13-206ENST00000397102 HIF3AQ9Y2N7 669 aa12.4□□□□□ -0.42
SEC13-206ENST00000397102 IGHV3-64DA0A0J9YX35 117 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 A0A0U1RQK1 487 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 MLNRO43193 412 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 TSPAN9O75954 239 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 OPN1MWP04001 364 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 SCG5P05408 212 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 OPN1MW2P0DN77 364 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 OPN1MW3P0DN78 364 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 IRF2P14316 349 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 PMELP40967 661 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 CYP51A1Q16850 503 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 METTL11BQ5VVY1 283 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 DHRS7BQ6IAN0 325 aaPredicted RBP12.39□□□□□ -0.43
SEC13-206ENST00000397102 OR2T2Q6IF00 324 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 C1orf94Q6P1W5 598 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 PATL1Q86TB9 770 aaKnown RBP12.39□□□□□ -0.43
SEC13-206ENST00000397102 PCYOX1LQ8NBM8 494 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 SCCPDHQ8NBX0 429 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 MRAPQ8TCY5 172 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 TMEM239Q8WW34 195 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 ZNF582Q96NG8 517 aaPredicted RBP12.39□□□□□ -0.43
SEC13-206ENST00000397102 TECTBQ96PL2 329 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 SIRPDQ9H106 197 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 EMC7Q9NPA0 242 aa12.39□□□□□ -0.43
SEC13-206ENST00000397102 F5H5P2 479 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 GATA4P43694 442 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 RGS6P49758 472 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 DLEU7Q6UYE1 221 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 MREGQ8N565 214 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 PNLDC1Q8NA58 520 aaKnown RBP12.38□□□□□ -0.43
SEC13-206ENST00000397102 Q8TCH9 128 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 SLC26A7Q8TE54 656 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 RASSF5Q8WWW0 418 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 SLC7A6Q92536 515 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 LHX4Q969G2 390 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 TAMM41Q96BW9 452 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 RASD2Q96D21 266 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 CENPHQ9H3R5 247 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 PTTG3PQ9NZH4 202 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 ERVK-18Q9QC07 812 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 MED31Q9Y3C7 131 aa12.38□□□□□ -0.43
SEC13-206ENST00000397102 RYR3Q15413 4870 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 ZNF816-ZNF321PA0A0X1KG74 233 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 A0A1B0GWJ7 208 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 A6NIZ1 184 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 IQCF6A8MYZ5 107 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 FUT4P22083 530 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 LOXL3P58215 753 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 TAS2R41P59536 307 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 CTXN1P60606 82 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 RAP1BP61224 184 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 RAP1AP62834 184 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 EGR3Q06889 387 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 AQP6Q13520 282 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 EPGNQ6UW88 154 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 OR5L1Q8NGL2 311 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 OR11L1Q8NGX0 322 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 LRRC8CQ8TDW0 803 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 ERGIC1Q969X5 290 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 PPP1R14AQ96A00 147 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 POLR2J2Q9GZM3 115 aaKnown RBP12.37□□□□□ -0.43
SEC13-206ENST00000397102 POLR2J3Q9H1A7 115 aaKnown RBP12.37□□□□□ -0.43
SEC13-206ENST00000397102 TMCC3Q9ULS5 477 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 USH1CQ9Y6N9 552 aa12.37□□□□□ -0.43
SEC13-206ENST00000397102 OR6C6A6NF89 314 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 POLR3GO15318 223 aaPredicted RBP12.36□□□□□ -0.43
SEC13-206ENST00000397102 OR5F1O95221 314 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 TGFBR2P37173 567 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 HERPUD1Q15011 391 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 KCNJ8Q15842 424 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 INTS11Q5TA45 600 aaKnown RBP12.36□□□□□ -0.43
SEC13-206ENST00000397102 Q6ZTK2 550 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 IGFN1Q86VF2 1251 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 GALNT4Q8N4A0 578 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 CELF2-AS1Q8N7Q2 184 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 LRRC75AQ8NAA5 344 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 BHLHE23Q8NDY6 225 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 C19orf18Q8NEA5 215 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 MMADHCQ9H3L0 296 aaPredicted RBP12.36□□□□□ -0.43
SEC13-206ENST00000397102 TMEM100Q9NV29 134 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 ATPIF1Q9UII2 106 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 RIMS3Q9UJD0 308 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 VPREB3Q9UKI3 123 aa12.36□□□□□ -0.43
SEC13-206ENST00000397102 TMEM120BA0PK00 339 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 BTBD17A6NE02 478 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 GPR37O15354 613 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 FAM20BO75063 409 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 FPR3P25089 353 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 CRYBA2P53672 197 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 RAD23AP54725 363 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 MTPNP58546 118 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 COX10Q12887 443 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 MAB21L1Q13394 359 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 SELPLGQ14242 412 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms