RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 J3QW42 95 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 XPNPEP2O43895 674 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 MT-ND1P03886 318 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 GPX2P18283 190 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 GUCA1AP43080 201 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-202ENST00000396629 HTR5AP47898 357 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 IFFO1Q0D2I5 559 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 OR2T2Q6IF00 324 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 SGCDQ92629 289 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 TECTBQ96PL2 329 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 RASSF4Q9H2L5 321 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 IKZF5Q9H5V7 419 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 ZNRD1Q9P1U0 126 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 ERVK-18Q9QC07 812 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 TMCC3Q9ULS5 477 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
SCFD1-202ENST00000396629 RNASEK-C17orf49H0YIS7 233 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 UBDO15205 165 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 DOK2O60496 412 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 EFNB2P52799 333 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 LAPTM4AQ15012 233 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 C11orf87Q6NUJ2 197 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 IGFN1Q86VF2 1251 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 CLDN22Q8N7P3 220 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 CELF2-AS1Q8N7Q2 184 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 PFN4Q8NHR9 129 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 NPRL2Q8WTW4 380 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 ERGIC1Q969X5 290 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 SGTBQ96EQ0 304 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 ZNF582Q96NG8 517 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-202ENST00000396629 TMEM109Q9BVC6 243 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 POLE4Q9NR33 117 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 PTTG3PQ9NZH4 202 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 VAPAQ9P0L0 249 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 ANGPT4Q9Y264 503 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 IGHV3-64DA0A0J9YX35 117 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 A0A1W2PPL8 197 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 BTBD17A6NE02 478 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 IQCF6A8MYZ5 107 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 M0QX08 132 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 SGCEO43556 437 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 FBP1P09467 338 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 IRF2P14316 349 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 CD247P20963 164 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 RBM34P42696 430 aaKnown RBP6.94□□□□□ -1.3
SCFD1-202ENST00000396629 MRPL19P49406 292 aaKnown RBP6.94□□□□□ -1.3
SCFD1-202ENST00000396629 RAD23AP54725 363 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 RPL27P61353 136 aaKnown RBP6.94□□□□□ -1.3
SCFD1-202ENST00000396629 ARF6P62330 175 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 SCRN3Q0VDG4 424 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 DBPQ10586 325 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-202ENST00000396629 MPP2Q14168 576 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 C11orf91Q3C1V1 193 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 CLEC12AQ5QGZ9 265 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 C11orf88Q6PI97 169 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 C19orf18Q8NEA5 215 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 LRRC8CQ8TDW0 803 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 PHF21AQ96BD5 680 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 RASD2Q96D21 266 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 C20orf141Q9NUB4 165 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 FOXJ3Q9UPW0 622 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 CORO2BQ9UQ03 480 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 CAB39Q9Y376 341 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-202ENST00000396629 FAM96BQ9Y3D0 163 aa6.94□□□□□ -1.3
SCFD1-202ENST00000396629 OR6C6A6NF89 314 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 FAM20BO75063 409 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 SNNO75324 88 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-202ENST00000396629 FCN3O75636 299 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 OPN1SWP03999 348 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 VIMP08670 466 aaKnown RBP6.93□□□□□ -1.3
SCFD1-202ENST00000396629 KITP10721 976 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 GABRA5P31644 462 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 CD200P41217 278 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 KIR2DS4P43632 304 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 RGS6P49758 472 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 MAB21L1Q13394 359 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 KCNJ8Q15842 424 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 PAGE3Q5JUK9 113 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 C1orf94Q6P1W5 598 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 MAVSQ7Z434 540 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 FUNDC1Q8IVP5 155 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 NKAIN4Q8IVV8 208 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 SPERTQ8NA61 448 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 OR5L1Q8NGL2 311 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 OR11L1Q8NGX0 322 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 SLC7A6Q92536 515 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 OR52B2Q96RD2 323 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 SMURF1Q9HCE7 757 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 EMC7Q9NPA0 242 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 TMEM100Q9NV29 134 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 THAP1Q9NVV9 213 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 HIF3AQ9Y2N7 669 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 KPTNQ9Y664 436 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 TENM3Q9P273 2699 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 LOC100653049A0A140TA62 436 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 ANKRD61A6NGH8 418 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 EVPLLA8MZ36 301 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 LGALS8O00214 317 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 KRT34O76011 436 aa6.93□□□□□ -1.3
SCFD1-202ENST00000396629 ECDO95905 644 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms