RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 RFX4Q33E94 735 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 OR2T2Q6IF00 324 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 LEG1Q6P5S2 330 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 FBXW12Q6X9E4 464 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 DEFB108BQ8NET1 73 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 SLC26A10Q8NG04 563 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 OR10AD1Q8NGE0 317 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 ZFAND2BQ8WV99 257 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 PTP4A1Q93096 173 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 OR2V2Q96R30 315 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 NMNAT3Q96T66 252 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 FN3KQ9H479 309 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 C7orf69Q9H7B7 122 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 MMP26Q9NRE1 261 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 IL19Q9UHD0 177 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 B9D1Q9UPM9 204 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 POLR1DQ9Y2S0 133 aa15.18■□□□□ 0.02
CXCL12-204ENST00000395793 F5H0A9 414 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-204ENST00000395793 H0YL77 283 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 ARPC3O15145 178 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 HIST1H1CP16403 213 aaKnown RBP15.17■□□□□ 0.02
CXCL12-204ENST00000395793 TNFSF4P23510 183 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 FPR3P25089 353 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 CRABP1P29762 137 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 CENPAP49450 140 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 MMP16P51512 607 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 PRSS12P56730 875 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 COX10Q12887 443 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 SCGB2A2Q13296 93 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 KRT72Q14CN4 511 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 KRTAP27-1Q3LI81 207 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 CFAP77Q6ZQR2 320 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 USP43Q70EL4 1123 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 PEG10Q86TG7 708 aaKnown RBP15.17■□□□□ 0.02
CXCL12-204ENST00000395793 LINC00346Q8IVM7 164 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 PGAM4Q8N0Y7 254 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 OR4K13Q8NH42 304 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 ST7LQ8TDW4 575 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 COG8Q96MW5 612 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 COQ7Q99807 217 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 HDHD2Q9H0R4 259 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 WDR76Q9H967 626 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 PATZ1Q9HBE1 687 aaKnown RBP15.17■□□□□ 0.02
CXCL12-204ENST00000395793 SRA1Q9HD15 236 aaKnown RBP15.17■□□□□ 0.02
CXCL12-204ENST00000395793 KRCC1Q9NPI7 259 aaPredicted RBP15.17■□□□□ 0.02
CXCL12-204ENST00000395793 ESM1Q9NQ30 184 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 ARL8BQ9NVJ2 186 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 MAGEL2Q9UJ55 1249 aa15.17■□□□□ 0.02
CXCL12-204ENST00000395793 TRAPPC2LH3BP13 241 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 J3QW42 95 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 MLNRO43193 412 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 TNFRSF1AP19438 455 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 GATA3P23771 443 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 RRM2P31350 389 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 SLC6A6P31641 620 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 GSSP48637 474 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 BTG1P62324 171 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 TMEM155Q4W5P6 130 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 SLC18B1Q6NT16 456 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 COLCA1Q6ZS62 124 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 LRRC28Q86X40 367 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-204ENST00000395793 TEX29Q8N6K0 151 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 SDR9C7Q8NEX9 313 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 ZNF420Q8TAQ5 688 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-204ENST00000395793 NANPQ8TBE9 248 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 C22orf15Q8WYQ4 148 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 DVL3Q92997 716 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-204ENST00000395793 APOBEC3DQ96AK3 386 aaPredicted RBP15.16■□□□□ 0.02
CXCL12-204ENST00000395793 GCM1Q9NP62 436 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 RPRD1BQ9NQG5 326 aaKnown RBP15.16■□□□□ 0.02
CXCL12-204ENST00000395793 PPP1R3CQ9UQK1 317 aa15.16■□□□□ 0.02
CXCL12-204ENST00000395793 PPIAL4EA0A075B759 164 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 PPIAL4CA0A0B4J2A2 164 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 IGHV3-64DA0A0J9YX35 117 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 OR6C68A6NDL8 312 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 A8MXK9 166 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 PPIAL4DF5H284 164 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 TMEM178BH3BS89 294 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 OR10H3O60404 316 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 GMNNO75496 209 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 FOXH1O75593 365 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 PPIAL4FP0DN26 164 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 ANOS1P23352 680 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 CFPP27918 469 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 SLC6A9P48067 706 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 RGS6P49758 472 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 TUSC1Q2TAM9 212 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 PGM2L1Q6PCE3 622 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 DNM1P34Q6PK57 102 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 C12orf54Q6X4T0 127 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 ZNF620Q6ZNG0 422 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 ZBTB46Q86UZ6 589 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 JAZF1Q86VZ6 243 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 SPICQ8N5J4 248 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 ZDHHC22Q8N966 263 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 ATG16L2Q8NAA4 619 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 GJC3Q8NFK1 279 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 OR8G5Q8NG78 346 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 MEGF10Q96KG7 1140 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 NSMCE2Q96MF7 247 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms