RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CLPSL1A2RUU4 121 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 HTR3EA5X5Y0 456 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 MELTFP08582 738 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 DBHP09172 617 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 CTLA4P16410 223 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 SELEP16581 610 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 SRP9P49458 86 aaKnown RBP12.79□□□□□ -0.36
CHMP3-202ENST00000393773 OTPQ5XKR4 325 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 OR2T2Q6IF00 324 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 NANOGP8Q6NSW7 305 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 ZNF841Q6ZN19 808 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 FAM122BQ7Z309 247 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 MOGAT3Q86VF5 341 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 NRMQ8IXM6 262 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 OFCC1Q8IZS5 231 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 ATG16L2Q8NAA4 619 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 PCYOX1LQ8NBM8 494 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 PTP4A1Q93096 173 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 SLC30A2Q9BRI3 323 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 NOX4Q9NPH5 578 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 CLN8Q9UBY8 286 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 ATPIF1Q9UII2 106 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 DNAH3Q8TD57 4116 aa12.79□□□□□ -0.36
CHMP3-202ENST00000393773 F5H5P2 479 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 TIMM23O14925 209 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 SFTPBP07988 381 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 ZNF26P17031 533 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-202ENST00000393773 PMELP40967 661 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 GATA4P43694 442 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 RGS6P49758 472 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 BPIFB3P59826 476 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 ST3GAL3Q11203 375 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 ANKDD1AQ495B1 522 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 CCDC92Q53HC0 331 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-202ENST00000393773 CYBRD1Q53TN4 286 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 GPR157Q5UAW9 335 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 WDR25Q64LD2 544 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-202ENST00000393773 ASPHD2Q6ICH7 369 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 LYPD2Q6UXB3 125 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 OR8J3Q8NGG0 315 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 OR13G1Q8NGZ3 307 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 OR1F12Q8NHA8 337 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 RASD2Q96D21 266 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 MAGEB18Q96M61 343 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 RBM4BQ9BQ04 359 aaKnown RBP12.78□□□□□ -0.36
CHMP3-202ENST00000393773 ASH2LQ9UBL3 628 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 POMT1Q9Y6A1 747 aa12.78□□□□□ -0.36
CHMP3-202ENST00000393773 TET2Q6N021 2002 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-202ENST00000393773 PRSS37A4D1T9 235 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 IQCF6A8MYZ5 107 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 CDC42EP2O14613 210 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 TNFRSF13BO14836 293 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-202ENST00000393773 ENSAO43768 121 aaKnown RBP12.77□□□□□ -0.37
CHMP3-202ENST00000393773 CRYBA1P05813 215 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 MMP9P14780 707 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 CFHR2P36980 270 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 PSMB10P40306 273 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 SLC9A3P48764 834 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 RPL15P61313 204 aaKnown RBP12.77□□□□□ -0.37
CHMP3-202ENST00000393773 PRKCDQ05655 676 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 LRRC23Q53EV4 343 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-202ENST00000393773 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 DCDC5Q6ZRR9 648 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 OAFQ86UD1 273 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 BHLHE23Q8NDY6 225 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 Q8TCH9 128 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 Q96M85 177 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 ZNF582Q96NG8 517 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-202ENST00000393773 ZNF570Q96NI8 536 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 TBX15Q96SF7 602 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 CTSZQ9UBR2 303 aa12.77□□□□□ -0.37
CHMP3-202ENST00000393773 LRRC30A6NM36 301 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 EFCAB9A8MZ26 197 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 RER1O15258 196 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 AHCYL1O43865 530 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 TSPAN15O95858 294 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 CD14P08571 375 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 RAD23AP54725 363 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 LSM6P62312 80 aaKnown RBP12.76□□□□□ -0.37
CHMP3-202ENST00000393773 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-202ENST00000393773 CLEC12AQ5QGZ9 265 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 ERICH5Q6P6B1 374 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 APOBEC3DQ96AK3 386 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-202ENST00000393773 FAM71F1Q96KD3 344 aaPredicted RBP12.76□□□□□ -0.37
CHMP3-202ENST00000393773 ZNF583Q96ND8 569 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 PCGF1Q9BSM1 259 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 RHCGQ9UBD6 479 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 GRHPRQ9UBQ7 328 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 SNX13Q9Y5W8 968 aa12.76□□□□□ -0.37
CHMP3-202ENST00000393773 FAM220BPB1ANY3 271 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 J3KTA2 159 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 IMPA2O14732 288 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 FFAR1O14842 300 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 CLPXO76031 633 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 IFNA14P01570 189 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 HLA-DPB1P04440 258 aa12.75□□□□□ -0.37
CHMP3-202ENST00000393773 GPR4P46093 362 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms