RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 DCXRQ7Z4W1 244 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 ERI1Q8IV48 349 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 SLC25A40Q8TBP6 338 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 MARS2Q96GW9 593 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 MAP6Q96JE9 813 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 COG8Q96MW5 612 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 ATF6BQ99941 703 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 GABARAPL3Q9BY60 117 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 MS4A5Q9H3V2 200 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 TUBG2Q9NRH3 451 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 SLCO1C1Q9NYB5 712 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 TAAR3PQ9P1P4 343 aa16.31■□□□□ 0.2
PDLIM7-204ENST00000393546 A0A1W2PPW3 197 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 M0R233 179 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 EI24O14681 340 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 TLX2O43763 284 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 PRKYO43930 277 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 SSX4O60224 188 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 CLPTM1O96005 669 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 F12P00748 615 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 ADRA2AP08913 450 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 POLR2IP36954 125 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 CLEC12BQ2HXU8 276 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 SPATA46Q5T0L3 261 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 RFPL4BQ6ZWI9 263 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 SHFQ7M4L6 423 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 CBR4Q8N4T8 237 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 TCEANCQ8N8B7 351 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 BBS1Q8NFJ9 593 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 OR5L1Q8NGL2 311 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 OR6N2Q8NGY6 317 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 ZMYND19Q96E35 227 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 Q96MF0 132 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 OR2J1Q9GZK6 312 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 MARCH7Q9H992 704 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 H2AFY2Q9P0M6 372 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 MYEF2Q9P2K5 600 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 STARD10Q9Y365 291 aa16.3■□□□□ 0.2
PDLIM7-204ENST00000393546 IGLV3-9A0A075B6K5 115 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 F5H5K5 113 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 H3BSA7 217 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 TPTEP56180 551 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 APOFQ13790 326 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 TAF13Q15543 124 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 NKPD1Q17RQ9 610 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 RSPO1Q2MKA7 263 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 MBNL2Q5VZF2 373 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 ZBTB49Q6ZSB9 765 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 DPY19L4Q7Z388 723 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 TIGD4Q8IY51 512 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 KLF14Q8TD94 323 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 SPTSSAQ969W0 71 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 SORCS2Q96PQ0 1159 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 PNRC2Q9NPJ4 139 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 CENPMQ9NSP4 180 aa16.29■□□□□ 0.2
PDLIM7-204ENST00000393546 J3QW42 95 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 IGHV3-13P01766 116 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 CD99P14209 185 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 SLC2A5P22732 501 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 ALDH3B1P43353 468 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 EFNB1P98172 346 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 EIF2B1Q14232 305 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 MAD2L1BPQ15013 274 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 KRTAP27-1Q3LI81 207 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 LCN1P1Q5VSP4 162 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 ZCCHC24Q8N2G6 241 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 OR10S1Q8NGN2 331 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 TMEM163Q8TC26 289 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 SNX33Q8WV41 574 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 NEU4Q8WWR8 484 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 APOBEC3DQ96AK3 386 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 EME1Q96AY2 570 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 SLAMF6Q96DU3 332 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 IL4I1Q96RQ9 567 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 TEAD3Q99594 435 aa16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 DDX28Q9NUL7 540 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-204ENST00000393546 MT-ND5P03915 603 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 ACSM4P0C7M7 580 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 PSKH1P11801 424 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 MPV17P39210 176 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 DSCR9P59020 149 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 CDC42P60953 191 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 ZIK1Q3SY52 487 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 ST7LQ8TDW4 575 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 SLC29A1Q99808 456 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 COPS4Q9BT78 406 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 TMUB1Q9BVT8 246 aa16.27■□□□□ 0.2
PDLIM7-204ENST00000393546 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 ZNF878C9JN71 531 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 M0R129 80 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 SELENOFO60613 162 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 LCATP04180 440 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 SLC15A1P46059 708 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 ALKBH6Q3KRA9 238 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 AADACL4Q5VUY2 407 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 NXNL2Q5VZ03 156 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 CLEC2AQ6UVW9 174 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 MEPCEQ7L2J0 689 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 ZNF454Q8N9F8 522 aa16.26■□□□□ 0.19
PDLIM7-204ENST00000393546 RHNO1Q9BSD3 238 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms