RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ADRA2AP08913 450 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 LIMS3P0CW19 117 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 LIMS4P0CW20 117 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 NR4A1P22736 598 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 CCR9P51686 369 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 MED21Q13503 144 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 SMN1Q16637 294 aaKnown RBP11.47□□□□□ -0.57
USP44-202ENST00000393091 CCDC58Q4VC31 144 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 C9orf135Q5VTT2 229 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 ZNF774Q6NX45 483 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 UNQ6126/PRO20091Q6UXV3 157 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 PLEKHG7Q6ZR37 379 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 OR6N2Q8NGY6 317 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 PAK1IP1Q9NWT1 392 aaPredicted RBP11.47□□□□□ -0.57
USP44-202ENST00000393091 LAMP5Q9UJQ1 280 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 METTL15A6NJ78 407 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 FAM171A2A8MVW0 826 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 CCL1P22362 96 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 CALCRP30988 508 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 EFNB3Q15768 340 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 OR51L1Q8NGJ5 315 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 SPTSSAQ969W0 71 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 AMELYQ99218 206 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 RGCCQ9H4X1 137 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 ZNF696Q9H7X3 374 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 FAM206AQ9NX38 181 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 SCN3BQ9NY72 215 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 MRM2Q9UI43 246 aaKnown RBP11.47□□□□□ -0.57
USP44-202ENST00000393091 BLOC1S6Q9UL45 172 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 A0A0U1RQV5 110 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 LOC390937A0A1W2PQ73 354 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 SEC14L2O76054 403 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
USP44-202ENST00000393091 RAB39AQ14964 217 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 ARL9Q6T311 187 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 ZNF295-AS1Q8N0V1 137 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 OR51G2Q8NGK0 314 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 LINC01560Q8TB33 94 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 BCL2L14Q9BZR8 327 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 RNF121Q9H920 327 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 ELOVL3Q9HB03 270 aa11.47□□□□□ -0.57
USP44-202ENST00000393091 RELNP78509 3460 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 HLA-DQA2P01906 255 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 SPARCP09486 303 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 CD79AP11912 226 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 ZNF250P15622 560 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 APLNRP35414 380 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 HGFACQ04756 655 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.57
USP44-202ENST00000393091 ZNF544Q6NX49 715 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 FBXW12Q6X9E4 464 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 NANOGP1Q8N7R0 232 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 PLPP7Q8NBV4 271 aa11.46□□□□□ -0.57
USP44-202ENST00000393091 IGLV3-9A0A075B6K5 115 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 DHRS7CA6NNS2 312 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 SMPD2O60906 423 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 CTAG2O75638 210 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 ISG15P05161 165 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 WNT5AP41221 380 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 RPS7P62081 194 aaKnown RBP11.46□□□□□ -0.58
USP44-202ENST00000393091 BSPH1Q075Z2 132 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 ZNF322Q6U7Q0 402 aaPredicted RBP11.46□□□□□ -0.58
USP44-202ENST00000393091 DOK1Q99704 481 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 PLEKHB1Q9UF11 243 aaPredicted RBP11.46□□□□□ -0.58
USP44-202ENST00000393091 LRP12Q9Y561 859 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 TANC2Q9HCD6 1990 aa11.46□□□□□ -0.58
USP44-202ENST00000393091 FLNCQ14315 2725 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.45□□□□□ -0.58
USP44-202ENST00000393091 CELA3BP08861 270 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 GLRXP35754 106 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 TPTEP56180 551 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 ZBTB37Q5TC79 503 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 SSX6Q7RTT6 188 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 APOBEC3DQ96AK3 386 aaPredicted RBP11.45□□□□□ -0.58
USP44-202ENST00000393091 C4orf45Q96LM5 186 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 SLCO1C1Q9NYB5 712 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 AASSQ9UDR5 926 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 RNF115Q9Y4L5 304 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 R4GMQ9 66 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 HTR1AP08908 422 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 TACSTD2P09758 323 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 CD53P19397 219 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 SSTR2P30874 369 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 RAD52P43351 418 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 GDI2P50395 445 aaKnown RBP11.45□□□□□ -0.58
USP44-202ENST00000393091 RPS23P62266 143 aaKnown RBP11.45□□□□□ -0.58
USP44-202ENST00000393091 GPR50Q13585 617 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 LINC00346Q8IVM7 164 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 G6PC2Q9NQR9 355 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 PLEK2Q9NYT0 353 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 NUFIP1Q9UHK0 495 aaKnown RBP11.45□□□□□ -0.58
USP44-202ENST00000393091 MYRFQ9Y2G1 1151 aa11.45□□□□□ -0.58
USP44-202ENST00000393091 OGG1O15527 345 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 CD3EP07766 207 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 ADH4P08319 380 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 COX6B1P14854 86 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 ATP6V1B1P15313 513 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 KITLGP21583 273 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 ST3GAL4Q11206 333 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms