RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ACTL6AO96019 429 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 ADAP00813 363 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 SNRPCP09234 159 aaKnown RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 RPS18P62269 152 aaKnown RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 SLC22A10Q63ZE4 541 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 PIP4P1Q86T03 277 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 STRADBQ9C0K7 418 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 ACKR4Q9NPB9 350 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 DNAJB11Q9UBS4 358 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 DLEU1O43261 78 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 SLC25A12O75746 678 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 CSTAP01040 98 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 S100A2P29034 98 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 CDX1P47902 265 aaPredicted RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 SRSF3P84103 164 aaKnown RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 RBM39Q14498 530 aaKnown RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 MPPED2Q15777 294 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 HES3Q5TGS1 186 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 STPG1Q5TH74 334 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 C1orf94Q6P1W5 598 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 NRMQ8IXM6 262 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 DEFB124Q8NES8 71 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 OR2G2Q8NGZ5 317 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 FAM46AQ96IP4 442 aaKnown RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 CNTNAP3BQ96NU0 1288 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 ZNF385AQ96PM9 386 aaKnown RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 LPAR4Q99677 370 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 MFFQ9GZY8 342 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 WDR54Q9H977 334 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 SPACA1Q9HBV2 294 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 UBQLN4Q9NRR5 601 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 FOXJ2Q9P0K8 574 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 RPL36Q9Y3U8 105 aaKnown RBP17.04■□□□□ 0.32
CCDC50-202ENST00000392456 ZFHX4Q86UP3 3567 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 SDK2Q58EX2 2172 aa17.04■□□□□ 0.32
CCDC50-202ENST00000392456 TSPAN2O60636 221 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 CELA2AP08217 269 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 JMJD7P0C870 316 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 MRPS11P82912 194 aaKnown RBP17.03■□□□□ 0.32
CCDC50-202ENST00000392456 FNDC7Q5VTL7 733 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 GLDNQ6ZMI3 551 aaPredicted RBP17.03■□□□□ 0.32
CCDC50-202ENST00000392456 ST7LQ8TDW4 575 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 POLR2J3Q9H1A7 115 aaKnown RBP17.03■□□□□ 0.32
CCDC50-202ENST00000392456 TRBV11-1A0A0K0K1C0 115 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 GMFGO60234 142 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 YIF1AO95070 293 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 RAD52P43351 418 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 OMPP47874 163 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 CD81P60033 236 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 DCAF7P61962 342 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 PLCXD2Q0VAA5 305 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 SNTB2Q13425 540 aaKnown RBP17.03■□□□□ 0.32
CCDC50-202ENST00000392456 RNASE10Q5GAN6 216 aaKnown RBP17.03■□□□□ 0.32
CCDC50-202ENST00000392456 UBAC2Q8NBM4 344 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 NEIL3Q8TAT5 605 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 ALG8Q9BVK2 526 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 ASF1BQ9NVP2 202 aa17.03■□□□□ 0.32
CCDC50-202ENST00000392456 FAM186AA6NE01 2351 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 PCNX3Q9H6A9 2034 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 FUT1P19526 365 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 WNT4P56705 351 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 SLC26A5P58743 744 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 KLF9Q13886 244 aaPredicted RBP17.02■□□□□ 0.32
CCDC50-202ENST00000392456 RSU1Q15404 277 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 PFN4Q8NHR9 129 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 TSSK6Q9BXA6 273 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 C20orf141Q9NUB4 165 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 ZNF69Q9UC07 566 aa17.02■□□□□ 0.32
CCDC50-202ENST00000392456 A0A1B0GWA3 101 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 TMEM210A6NLX4 147 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 EREGO14944 169 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 RRP8O43159 456 aaKnown RBP17.02■□□□□ 0.31
CCDC50-202ENST00000392456 OR4E1P0C645 316 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 OSMP13725 252 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 GPR4P46093 362 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 RAP1AP62834 184 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 GAGE1Q13065 139 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 DYRK1AQ13627 763 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 MARCH3Q86UD3 253 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 IQCF1Q8N6M8 205 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 ARIH2OSQ8N7S6 290 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 CPEB3Q8NE35 698 aaKnown RBP17.02■□□□□ 0.31
CCDC50-202ENST00000392456 LIN37Q96GY3 246 aaPredicted RBP17.02■□□□□ 0.31
CCDC50-202ENST00000392456 TAAR9Q96RI9 348 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 PLA2G12AQ9BZM1 189 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 SPRY4Q9C004 299 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 GAR1Q9NY12 217 aaKnown RBP17.02■□□□□ 0.31
CCDC50-202ENST00000392456 TESQ9UGI8 421 aaKnown RBP17.02■□□□□ 0.31
CCDC50-202ENST00000392456 HS3ST3B1Q9Y662 390 aa17.02■□□□□ 0.31
CCDC50-202ENST00000392456 SPAARA0A1B0GVQ0 90 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 H3BN98 237 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 CDC42EP2O14613 210 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 DGCR2P98153 550 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 HGFACQ04756 655 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 PCOLCEQ15113 449 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 RNASE12Q5GAN4 147 aaKnown RBP17.01■□□□□ 0.31
CCDC50-202ENST00000392456 IDNKQ5T6J7 187 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 KIRREL2Q6UWL6 708 aa17.01■□□□□ 0.31
CCDC50-202ENST00000392456 IL20RBQ6UXL0 311 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms