RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 ATF6P18850 670 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 PRPHP41219 470 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 EIF1P41567 113 aaKnown RBP1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 PRLHRP49683 370 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 CDH6P55285 790 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 GFERP55789 205 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 RBX1P62877 108 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 BAMBIQ13145 260 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZNF726P1Q15940 193 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 YIF1BQ5BJH7 314 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 TEX30Q5JUR7 227 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 UBE2UQ5VVX9 321 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZNF680Q8NEM1 530 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZNF317Q96PQ6 595 aaPredicted RBP1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZBTB18Q99592 522 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 MICU1Q9BPX6 476 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 CRACR2AQ9BSW2 395 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 GGTLC1Q9BX51 225 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZSCAN16Q9H4T2 348 aaPredicted RBP1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 EDA2RQ9HAV5 297 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 NEK6Q9HC98 313 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 C21orf62Q9NYP8 219 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 STARD10Q9Y365 291 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 MMACHCQ9Y4U1 282 aa1.51□□□□□ -2.17
SNORA40.3-201ENST00000390964 USP47Q96K76 1375 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZSWIM8A7E2V4 1837 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 A0A1B0GW55 424 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 A0A1W2PNN7 141 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 ARHGEF35A5YM69 484 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 KRBOX1C9JBD0 128 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 RDH16O75452 317 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 GLSO94925 669 aaPredicted RBP1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 TSPAN13O95857 204 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 PAHP00439 452 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 CST1P01037 141 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 GLAP06280 429 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 DUX4L2P0CJ85 424 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 DUX4L3P0CJ86 424 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 DUX4L5P0CJ88 424 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 DUX4L6P0CJ89 424 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 DUX4L7P0CJ90 424 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 GGT1P19440 569 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 NAA10P41227 235 aaPredicted RBP1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 TMED10P49755 219 aaKnown RBP1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZNF235Q14590 738 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 PGGHGQ32M88 737 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 GPR107Q5VW38 600 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 C16orf47Q6ZP98 133 aaPredicted RBP1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZNF101Q8IZC7 436 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 CHST4Q8NCG5 386 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 LRRC29Q8WV35 223 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 TM2D3Q9BRN9 247 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 CHCHD7Q9BUK0 85 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 SAMD10Q9BYL1 202 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 ILKAPQ9H0C8 392 aaPredicted RBP1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 RACGAP1Q9H0H5 632 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 DHX35Q9H5Z1 703 aaKnown RBP1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 RHBDL2Q9NX52 303 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 HYPKQ9NX55 129 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 DUX4Q9UBX2 424 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 LGALS13Q9UHV8 139 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 ISY1Q9ULR0 285 aaKnown RBP1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 TRIP11Q15643 1979 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 TSPOAP1O95153 1857 aa1.5□□□□□ -2.17
SNORA40.3-201ENST00000390964 IGHV1-3A0A0C4DH29 117 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 IGKV1-8A0A0C4DH67 115 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 LYRM9A8MSI8 78 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 CDC40O60508 579 aaKnown RBP eCLIP1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 EIF4E2O60573 245 aaKnown RBP1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 NDUFB10O96000 172 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 LHBP01229 141 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 EIF4EP06730 217 aaKnown RBP1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 CRYGBP07316 175 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 ARFIP1P53367 373 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 PRMT2P55345 433 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 ACTR1AP61163 376 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 RPL23P62829 140 aaKnown RBP1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 BST1Q10588 318 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 ANKDD1AQ495B1 522 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 SOHLH1Q5JUK2 328 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 PRAMEF5Q5TYX0 476 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 PRAMEF6Q5VXH4 476 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 CENPPQ6IPU0 288 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 NBPF5PQ86XG9 351 aaPredicted RBP1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 NKAIN4Q8IVV8 208 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 PRELID2Q8N945 189 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 C11orf72Q8NBR9 251 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 OR11H7Q8NGC8 314 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 OR5B3Q8NH48 314 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 OR10G6Q8NH81 332 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 NT5C3BQ969T7 300 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 TMEM230Q96A57 120 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 WDR34Q96EX3 536 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 COL21A1Q96P44 957 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 OR5B12Q96R08 314 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 RHOXF2Q9BQY4 288 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 SHANK2-AS3Q9BTD1 123 aa1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 PSMC3IPQ9P2W1 217 aaPredicted RBP1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 UXTQ9UBK9 157 aaPredicted RBP1.49□□□□□ -2.17
SNORA40.3-201ENST00000390964 ZNF407Q9C0G0 2248 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms