RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PACSIN2Q9UNF0 486 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 DIMT1Q9UNQ2 313 aaKnown RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 ENTPD4Q9Y227 616 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CAB39Q9Y376 341 aaPredicted RBP-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 GMPPBQ9Y5P6 360 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 CEMIPQ8WUJ3 1361 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MUC4Q99102 2169 aa-0.63□□□□□ -2.51
TRAJ28-201ENST00000390509 MROH7Q68CQ1 1323 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF532Q9HCE3 1301 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MPDZO75970 2070 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 DENND4AQ7Z401 1863 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 FGD5Q6ZNL6 1462 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 METP08581 1390 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 LOC102723996A0A087X1L8 192 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 C15orf38-AP3S2A0A0A6YYH1 394 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 NSG1A0A0A6YYJ2 146 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 IGHV3-21A0A0B4J1V1 117 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAV39A0A0B4J263 110 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAV41A0A0B4J266 112 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A0D9SG52 128 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 LOC100653049A0A140TA62 436 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CCDC196A0A1B0GTZ2 297 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM269A0A1B0GVZ9 245 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 DHRS12A0PJE2 317 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 C5orf51A6NDU8 294 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 BTBD17A6NE02 478 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 GABRR3A8MPY1 467 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CENPBD1B2RD01 187 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 LOC730098B7Z3J9 87 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR89AB7ZAQ6 455 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 NDUFC2-KCTD14E9PQ53 114 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 H3BMM0 161 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 FCN1O00602 326 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 UBDO15205 165 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CLOCKO15516 846 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 KLHL41O60662 606 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PRAF2O60831 178 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PEX14O75381 377 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 SEC22BO75396 215 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PSIP1O75475 530 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 UGT2B17O75795 530 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 KRT34O76011 436 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 B3GAT3O94766 335 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 SEMA3DO95025 777 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 TXNDC12O95881 172 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 EPOP01588 193 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MT-ND3P03897 115 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 TRGV3P03979 118 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MAS1P04201 325 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 POLBP06746 335 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CAPN1P07384 714 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 LDHCP07864 332 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ERCC1P07992 297 aaPredicted RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MYL3P08590 195 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 SERPINF2P08697 491 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 KRT16P08779 473 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CLTBP09497 229 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 GPR89BP0CG08 455 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 HSPD1P10809 573 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CD37P11049 281 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PDHBP11177 359 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 UBL4AP11441 157 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PTHLHP12272 177 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CCNB1P14635 433 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 GABRA1P14867 456 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CPA3P15088 417 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 B4GALT1P15291 398 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 H2AFXP16104 143 aaPredicted RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 NCF2P19878 526 aaPredicted RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 DRD5P21918 477 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PRKACBP22694 351 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MIPP30301 263 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 RFC2P35250 354 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CFHR2P36980 270 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PPARGP37231 505 aaPredicted RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 LEPP41159 167 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ACAA2P42765 397 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ACADSBP45954 432 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CEBPDP49716 269 aaPredicted RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 NOVA1P51513 510 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 P2RX1P51575 399 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF138P52744 262 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 GBX2P52951 348 aaPredicted RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 AP3M2P53677 418 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 AK2P54819 239 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 GEMP55040 296 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MFAP1P55081 439 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 GFERP55789 205 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CTBP2P56545 445 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 UBE2NP61088 152 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ACTR3P61158 418 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 HERVK_113P63132 956 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ERVK-8P63133 956 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ERVK-25P63136 954 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 RPS21P63220 83 aaKnown RBP-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 FKBP1BP68106 108 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 CDK16Q00536 496 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 MYBPC1Q00872 1141 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 PSG9Q00887 426 aa-0.64□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF90Q03938 601 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms