RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ATG16L2Q8NAA4 619 aa22.24■■□□□ 1.15
NPHP3-202ENST00000383282 OR5L1Q8NGL2 311 aa22.24■■□□□ 1.15
NPHP3-202ENST00000383282 OR1F12Q8NHA8 337 aa22.24■■□□□ 1.15
NPHP3-202ENST00000383282 FAM162AQ96A26 154 aa22.24■■□□□ 1.15
NPHP3-202ENST00000383282 RASD2Q96D21 266 aa22.24■■□□□ 1.15
NPHP3-202ENST00000383282 FAM46AQ96IP4 442 aaKnown RBP22.24■■□□□ 1.15
NPHP3-202ENST00000383282 KCTD14Q9BQ13 255 aaPredicted RBP22.24■■□□□ 1.15
NPHP3-202ENST00000383282 SYT4Q9H2B2 425 aa22.24■■□□□ 1.15
NPHP3-202ENST00000383282 ATPIF1Q9UII2 106 aa22.24■■□□□ 1.15
NPHP3-202ENST00000383282 COA3Q9Y2R0 106 aaPredicted RBP22.24■■□□□ 1.15
NPHP3-202ENST00000383282 POLR1DQ9Y2S0 133 aa22.24■■□□□ 1.15
NPHP3-202ENST00000383282 A8MXK9 166 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 IFNL4K9M1U5 179 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 ZNF26P17031 533 aaPredicted RBP22.23■■□□□ 1.15
NPHP3-202ENST00000383282 FOXL1Q12952 345 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 ZMYND11Q15326 602 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 DEFB107AQ8IZN7 70 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 OR5AS1Q8N127 324 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 SIGLECL1Q8N7X8 197 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 SLC7A6Q92536 515 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 SIGLEC11Q96RL6 698 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 KRCC1Q9NPI7 259 aaPredicted RBP22.23■■□□□ 1.15
NPHP3-202ENST00000383282 ABCD2Q9UBJ2 740 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 OR5V1Q9UGF6 321 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 FAM32AQ9Y421 112 aaKnown RBP22.23■■□□□ 1.15
NPHP3-202ENST00000383282 INSIG2Q9Y5U4 225 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 ENPP4Q9Y6X5 453 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 TENM1Q9UKZ4 2725 aa22.23■■□□□ 1.15
NPHP3-202ENST00000383282 ARHGAP32A7KAX9 2087 aa22.22■■□□□ 1.15
NPHP3-202ENST00000383282 OR6C6A6NF89 314 aa22.22■■□□□ 1.15
NPHP3-202ENST00000383282 TRAPPC2LH3BP13 241 aa22.22■■□□□ 1.15
NPHP3-202ENST00000383282 SEC61A1P61619 476 aaKnown RBP22.22■■□□□ 1.15
NPHP3-202ENST00000383282 ADCK1Q86TW2 530 aa22.22■■□□□ 1.15
NPHP3-202ENST00000383282 SLC7A13Q8TCU3 470 aa22.22■■□□□ 1.15
NPHP3-202ENST00000383282 GPX7Q96SL4 187 aaPredicted RBP22.22■■□□□ 1.15
NPHP3-202ENST00000383282 ZMAT3Q9HA38 289 aaKnown RBP22.22■■□□□ 1.15
NPHP3-202ENST00000383282 NRIP3Q9NQ35 241 aa22.22■■□□□ 1.15
NPHP3-202ENST00000383282 VSX1Q9NZR4 365 aaPredicted RBP22.22■■□□□ 1.15
NPHP3-202ENST00000383282 SIGLEC7Q9Y286 467 aa22.22■■□□□ 1.15
NPHP3-202ENST00000383282 F5H0A9 414 aaPredicted RBP22.21■■□□□ 1.15
NPHP3-202ENST00000383282 TMEM178BH3BS89 294 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 H1F0P07305 194 aaKnown RBP22.21■■□□□ 1.15
NPHP3-202ENST00000383282 GSK3BP49841 420 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 RPS6KA3P51812 740 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 CCDC92Q53HC0 331 aaPredicted RBP22.21■■□□□ 1.15
NPHP3-202ENST00000383282 DOK3Q7L591 496 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 PTTG3PQ9NZH4 202 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 ZNF69Q9UC07 566 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 RPS6KA6Q9UK32 745 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 AURKCQ9UQB9 309 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 LRCH1Q9Y2L9 728 aa22.21■■□□□ 1.15
NPHP3-202ENST00000383282 A0A1W2PRQ8 180 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 SOCS2O14508 198 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 PTP4A3O75365 173 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 HKR1P10072 659 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 CPT2P23786 658 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 PRTN3P24158 256 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 RBMXP38159 391 aaKnown RBP22.2■■□□□ 1.14
NPHP3-202ENST00000383282 ERFP50548 548 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 MMP16P51512 607 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 DGCR6Q14129 220 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 FGD3Q5JSP0 725 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 SAMD4BQ5PRF9 694 aaKnown RBP22.2■■□□□ 1.14
NPHP3-202ENST00000383282 OTPQ5XKR4 325 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 PGM2L1Q6PCE3 622 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 DNM1P34Q6PK57 102 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 FBXW12Q6X9E4 464 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 OR13G1Q8NGZ3 307 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 ZNF582Q96NG8 517 aaPredicted RBP22.2■■□□□ 1.14
NPHP3-202ENST00000383282 CDRT15Q96T59 188 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 GCM1Q9NP62 436 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 IER3IP1Q9Y5U9 82 aa22.2■■□□□ 1.14
NPHP3-202ENST00000383282 CEACAM18A8MTB9 384 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 RER1O15258 196 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 GMNNO75496 209 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 DBHP09172 617 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 T-ENOLP0DO92 83 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 CRABP1P29762 137 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 CENPAP49450 140 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 SRP9P49458 86 aaKnown RBP22.19■■□□□ 1.14
NPHP3-202ENST00000383282 HLXQ14774 488 aaPredicted RBP22.19■■□□□ 1.14
NPHP3-202ENST00000383282 DPY19L2P2Q6ZN68 376 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 GJC3Q8NFK1 279 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 OR8G5Q8NG78 346 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 APOBEC3DQ96AK3 386 aaPredicted RBP22.19■■□□□ 1.14
NPHP3-202ENST00000383282 RSRC1Q96IZ7 334 aaKnown RBP22.19■■□□□ 1.14
NPHP3-202ENST00000383282 MS4A7Q9GZW8 240 aaPredicted RBP22.19■■□□□ 1.14
NPHP3-202ENST00000383282 NUAK2Q9H093 628 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 IL20RAQ9UHF4 553 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 PCDHGB1Q9Y5G3 927 aa22.19■■□□□ 1.14
NPHP3-202ENST00000383282 BAMBIQ13145 260 aa22.18■■□□□ 1.14
NPHP3-202ENST00000383282 KCNMB1Q16558 191 aa22.18■■□□□ 1.14
NPHP3-202ENST00000383282 KLF17Q5JT82 389 aaPredicted RBP22.18■■□□□ 1.14
NPHP3-202ENST00000383282 OR2T2Q6IF00 324 aa22.18■■□□□ 1.14
NPHP3-202ENST00000383282 BTNL3Q6UXE8 466 aa22.18■■□□□ 1.14
NPHP3-202ENST00000383282 RNF148Q8N7C7 305 aa22.18■■□□□ 1.14
NPHP3-202ENST00000383282 OR10AD1Q8NGE0 317 aa22.18■■□□□ 1.14
NPHP3-202ENST00000383282 MEGF10Q96KG7 1140 aa22.18■■□□□ 1.14
NPHP3-202ENST00000383282 COQ7Q99807 217 aa22.18■■□□□ 1.14
NPHP3-202ENST00000383282 ZNF747Q9BV97 191 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms