RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 PHF21AQ96BD5 680 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 MAELQ96JY0 434 aaKnown RBP14.29□□□□□ -0.12
HMGN1-203ENST00000380748 ALG12Q9BV10 488 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 TXNIPQ9H3M7 391 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 SMURF1Q9HCE7 757 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 C20orf141Q9NUB4 165 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 VAPAQ9P0L0 249 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 ZNRD1Q9P1U0 126 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 FAM96BQ9Y3D0 163 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 USH1CQ9Y6N9 552 aa14.29□□□□□ -0.12
HMGN1-203ENST00000380748 BTBD17A6NE02 478 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 NPIPB13A6NJU9 1138 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 NPIPB4C9JG80 1138 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 MT-ND1P03886 318 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 TSPAN19P0C672 248 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 GABRA5P31644 462 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 GUCA1AP43080 201 aaPredicted RBP14.28□□□□□ -0.12
HMGN1-203ENST00000380748 ARF6P62330 175 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 MPP2Q14168 576 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 MAVSQ7Z434 540 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 GALNT4Q8N4A0 578 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 PNLDC1Q8NA58 520 aaKnown RBP14.28□□□□□ -0.12
HMGN1-203ENST00000380748 BHLHE23Q8NDY6 225 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 SGTBQ96EQ0 304 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 RBP7Q96R05 134 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 OR52B2Q96RD2 323 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 POLE4Q9NR33 117 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 ERVK-18Q9QC07 812 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 FBLN5Q9UBX5 448 aa14.28□□□□□ -0.12
HMGN1-203ENST00000380748 TRBV5-3A0A0A0MS03 114 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 LOC100653049A0A140TA62 436 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 UBDO15205 165 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 SGCEO43556 437 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 FAM20BO75063 409 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 KRT34O76011 436 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 HLA-DPB1P04440 258 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 IRF2P14316 349 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 PPIBP23284 216 aaKnown RBP14.27□□□□□ -0.13
HMGN1-203ENST00000380748 SCRN3Q0VDG4 424 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 CLEC12AQ5QGZ9 265 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 CCBE1Q6UXH8 406 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-203ENST00000380748 FBXW12Q6X9E4 464 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 LYG1Q8N1E2 194 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 CFHR4Q92496 578 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 COG8Q96MW5 612 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 ZNF582Q96NG8 517 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-203ENST00000380748 PCDHAC1Q9H158 963 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 PPA2Q9H2U2 334 aa14.27□□□□□ -0.13
HMGN1-203ENST00000380748 EPPK1P58107 5090 aaKnown RBP14.26□□□□□ -0.13
HMGN1-203ENST00000380748 ANKRD61A6NGH8 418 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 M0QX08 132 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 XPNPEP2O43895 674 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 FCN3O75636 299 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 MPIG6BO95866 241 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 GPX2P18283 190 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 GATA4P43694 442 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 PAGE3Q5JUK9 113 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 C1orf122Q6ZSJ8 110 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 NKAIN4Q8IVV8 208 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 Q8TCH9 128 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 TMEM255BQ8WV15 326 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 UFSP2Q9NUQ7 469 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 BIRC6Q9NR09 4857 aa14.26□□□□□ -0.13
HMGN1-203ENST00000380748 ELOVL7A1L3X0 281 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 ADAM20O43506 726 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 OR10H3O60404 316 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 DBHP09172 617 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 FBP1P09467 338 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 CD247P20963 164 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 EFNB2P52799 333 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 RPL27P61353 136 aaKnown RBP14.25□□□□□ -0.13
HMGN1-203ENST00000380748 PRB3Q04118 309 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-203ENST00000380748 MAB21L1Q13394 359 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 MPPED2Q15777 294 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 ALG10Q5BKT4 473 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 PRAMEF6Q5VXH4 476 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 FOXB2Q5VYV0 432 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 OTPQ5XKR4 325 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 SFRP4Q6FHJ7 346 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-203ENST00000380748 VMO1Q7Z5L0 202 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 IGFN1Q86VF2 1251 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 KLHDC1Q8N7A1 406 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 OR11L1Q8NGX0 322 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 PAIP2Q9BPZ3 127 aaKnown RBP14.25□□□□□ -0.13
HMGN1-203ENST00000380748 RYR2Q92736 4967 aa14.25□□□□□ -0.13
HMGN1-203ENST00000380748 OR6C6A6NF89 314 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 IQCF6A8MYZ5 107 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 H7C1C5 153 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 FPR3P25089 353 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 PRSS12P56730 875 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 LCN6P62502 163 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 FUNDC1Q8IVP5 155 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 BOLLQ8N9W6 283 aaKnown RBP14.24□□□□□ -0.13
HMGN1-203ENST00000380748 PCYOX1LQ8NBM8 494 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 PPP1R35Q8TAP8 253 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 FNDC8Q8TC99 324 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 LIPHQ8WWY8 451 aa14.24□□□□□ -0.13
HMGN1-203ENST00000380748 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.24□□□□□ -0.13
HMGN1-203ENST00000380748 RASD2Q96D21 266 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms