RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CALCBP10092 127 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 PRKXP51817 358 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 CLDN18P56856 261 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 ENDOGQ14249 297 aaKnown RBP17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 AAED1Q7RTV5 226 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 LRRC18Q8N456 261 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 CELF2-AS1Q8N7Q2 184 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 MRI1Q9BV20 369 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 SLC22A4Q9H015 551 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 DDX28Q9NUL7 540 aaKnown RBP17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 FOXJ3Q9UPW0 622 aa17.52■□□□□ 0.4
PDLIM5-205ENST00000380180 WT1P19544 449 aaPredicted RBP17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 ZNF84P51523 738 aa17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 ARG2P78540 354 aa17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 ABHD3Q8WU67 409 aa17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 THAP7Q9BT49 309 aaPredicted RBP17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 NIPAL2Q9H841 368 aa17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 TAS2R4Q9NYW5 299 aa17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 MRPS7Q9Y2R9 242 aaKnown RBP17.52■□□□□ 0.39
PDLIM5-205ENST00000380180 LANCL1O43813 399 aa17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 LMX1BO60663 402 aa17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 UBL3O95164 117 aa17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 HNRNPCP07910 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 IGFBP3P17936 291 aaPredicted RBP17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 PSMA6P60900 246 aaKnown RBP17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 PPIAP62937 165 aaKnown RBP17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 HYAL4Q2M3T9 481 aa17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 SLC25A38Q96DW6 304 aa17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 COL25A1Q9BXS0 654 aaPredicted RBP17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 HDHD2Q9H0R4 259 aa17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 CKLFQ9UBR5 152 aa17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 STEAP1Q9UHE8 339 aa17.51■□□□□ 0.39
PDLIM5-205ENST00000380180 ZNF708P17019 499 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 INPP1P49441 399 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 ZFP62Q8NB50 900 aaPredicted RBP17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 ZFP3Q96NJ6 502 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 IRF2BPLQ9H1B7 796 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 ETAA1Q9NY74 926 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 DLL3Q9NYJ7 618 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 NUFIP1Q9UHK0 495 aaKnown RBP17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 CAMK2AQ9UQM7 478 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 N6AMT1Q9Y5N5 214 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 FAM186AA6NE01 2351 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 ITGB2P05107 769 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 FSTP19883 344 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 NR4A2P43354 598 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 CCL11P51671 97 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 PITPNAQ00169 270 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 GJC3Q8NFK1 279 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 RFT1Q96AA3 541 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 CRLF2Q9HC73 371 aa17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 URB1O60287 2271 aaKnown RBP17.5■□□□□ 0.39
PDLIM5-205ENST00000380180 GVINP1Q7Z2Y8 2422 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 EEF1E1O43324 174 aaKnown RBP17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 ITGA5P08648 1049 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 SLC2A1P11166 492 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 ZNF121P58317 390 aaPredicted RBP17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 MRPS34P82930 218 aaKnown RBP17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 GALK2Q01415 458 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 ZNF766Q5HY98 468 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 ZNF57Q68EA5 555 aaPredicted RBP17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 LUZP2Q86TE4 346 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 SERPINA12Q8IW75 414 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 IZUMO1Q8IYV9 350 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 PLPP7Q8NBV4 271 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 SYNPRQ8TBG9 265 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 SCMH1Q96GD3 660 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 ABCG5Q9H222 651 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 SLC5A6Q9Y289 635 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 CEP250Q9BV73 2442 aa17.49■□□□□ 0.39
PDLIM5-205ENST00000380180 MMP15P51511 669 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 GRB2P62993 217 aaKnown RBP17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 SLC10A1Q14973 349 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 FAM27BQ5VT28 67 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 PLXDC2Q6UX71 529 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 BAIAP2L2Q6UXY1 529 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 GPR137CQ8N3F9 429 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 TRIM63Q969Q1 353 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 MOB1AQ9H8S9 216 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 ZNF275Q9NSD4 429 aaPredicted RBP17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 ETV7Q9Y603 341 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 TTLL8A6PVC2 850 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 LYRM1O43325 122 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 SYT7O43581 403 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 CFPP27918 469 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 KIR2DL3P43628 341 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 MAP2K3P46734 347 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 CX3CR1P49238 355 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 ART1P52961 327 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 HIST1H3AP68431 136 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 HIST2H3PS2Q5TEC6 136 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 HIST2H3AQ71DI3 136 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 MEIOBQ8N635 442 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 FDCSPQ8NFU4 85 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 OR51A2Q8NGJ7 313 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 OR51E1Q8TCB6 317 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 FGGYQ96C11 551 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 FBXO17Q96EF6 278 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 S100A16Q96FQ6 103 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms