RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 CLDN12P56749 244 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 HIST1H3AP68431 136 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 SRYQ05066 204 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 HIST2H3PS2Q5TEC6 136 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 HIST2H3AQ71DI3 136 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 ASCL5Q7RTU5 278 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 NRARPQ7Z6K4 114 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 OR13C3Q8NGS6 347 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 ABHD1Q96SE0 405 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 OR5V1Q9UGF6 321 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 CLEC4AQ9UMR7 237 aa13.58□□□□□ -0.24
RAB3IP-204ENST00000378815 IGKV3D-15A0A087WSY6 115 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 P2RY10O00398 339 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 TNFSF10P50591 281 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 TAF13Q15543 124 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 BCL2A1Q16548 175 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 FAM27BQ5VT28 67 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 PYHIN1Q6K0P9 492 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 FAM109AQ8N4B1 249 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 MEIOBQ8N635 442 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 GJC3Q8NFK1 279 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 TMEM45BQ96B21 275 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 PPP1R14BQ96C90 147 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 SLC25A38Q96DW6 304 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 C11orf54Q9H0W9 315 aaPredicted RBP13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 CKLFQ9UBR5 152 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 CNOT1A5YKK6 2376 aaKnown RBP13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 LINC00854A0A1B0GVQ3 168 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 CTSSP25774 331 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 NR4A2P43354 598 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 CCL11P51671 97 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 GRB2P62993 217 aaKnown RBP13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 CLN3Q13286 438 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 CMTM4Q8IZR5 234 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 TMEM178AQ8NBL3 297 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 FDCSPQ8NFU4 85 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 TAS2R4Q9NYW5 299 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 ETV7Q9Y603 341 aa13.57□□□□□ -0.24
RAB3IP-204ENST00000378815 ZFHX2Q9C0A1 2572 aaPredicted RBP13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 UBL3O95164 117 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 ITGB2P05107 769 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 CD37P11049 281 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 SCAND1P57086 179 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 SLC10A1Q14973 349 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 RIPPLY2Q5TAB7 128 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 IGFL2Q6UWQ7 119 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 CADM3Q8N126 398 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 C19orf18Q8NEA5 215 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 CPT1CQ8TCG5 803 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 SNRNP27Q8WVK2 155 aaKnown RBP13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 CRLF2Q9HC73 371 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 RHBDL2Q9NX52 303 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 STEAP1Q9UHE8 339 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 RIF1Q5UIP0 2472 aaKnown RBP13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 ACTL6AO96019 429 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 ADRB1P08588 477 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 PRKXP51817 358 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 ZNF121P58317 390 aaPredicted RBP13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 RNFT1Q5M7Z0 435 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 BAIAP2L2Q6UXY1 529 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 LINGO2Q7L985 606 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 GPR137CQ8N3F9 429 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 LRRC18Q8N456 261 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 SLC22A4Q9H015 551 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 ABCG5Q9H222 651 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 ZNF275Q9NSD4 429 aaPredicted RBP13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 PAQR5Q9NXK6 330 aaPredicted RBP13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 CAMK2AQ9UQM7 478 aa13.56□□□□□ -0.24
RAB3IP-204ENST00000378815 ACOT7O00154 380 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 LMX1BO60663 402 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 CX3CR1P49238 355 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 FAM166AQ6J272 317 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 TRIM63Q969Q1 353 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 FBXO17Q96EF6 278 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 NEDD4LQ96PU5 975 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 TMEM38BQ9NVV0 291 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 CSAG2Q9Y5P2 127 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 LIPGQ9Y5X9 500 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 PHF3Q92576 2039 aaKnown RBP13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 CELSR3Q9NYQ7 3312 aa13.55□□□□□ -0.24
RAB3IP-204ENST00000378815 A0A1B0GTI1 187 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 SYT7O43581 403 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 SYNGR4O95473 234 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 ITGA5P08648 1049 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 PITPNAQ00169 270 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 CCDC92Q53HC0 331 aaPredicted RBP13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 PRSS45Q7RTY3 260 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 OR8B12Q8NGG6 310 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 ALKBH3Q96Q83 286 aaPredicted RBP13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 THAP7Q9BT49 309 aaPredicted RBP13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 ZDHHC11Q9H8X9 412 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 MCTS1Q9ULC4 181 aaKnown RBP13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 ZNF891A8MT65 544 aaPredicted RBP13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 SLC17A2O00624 439 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 LANCL1O43813 399 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 MMP15P51511 669 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 ZNF554Q86TJ5 538 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 RAB40AQ8WXH6 277 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 RFT1Q96AA3 541 aa13.54□□□□□ -0.24
RAB3IP-204ENST00000378815 NEURL2Q9BR09 285 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms