RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OIT3Q8WWZ8 545 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 MUCL1Q96DR8 90 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF799Q96GE5 643 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 TSPAN32Q96QS1 320 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 ADGRL4Q9HBW9 690 aa12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 GDF2Q9UK05 429 aaPredicted RBP12.76□□□□□ -0.37
SHROOM1-203ENST00000378679 SPAARA0A1B0GVQ0 90 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 CTLA4P16410 223 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF770Q6IQ21 691 aaPredicted RBP12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 CCDC36Q8IYA8 594 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 DND1Q8IYX4 353 aaKnown RBP12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 SLC38A6Q8IZM9 456 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 SPAG16Q8N0X2 631 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 C12orf10Q9HB07 376 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 GPR84Q9NQS5 396 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ROS1P08922 2347 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 A0A1B0GV50 99 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 TRABD2BA6NFA1 517 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 BLVRBP30043 206 aaPredicted RBP12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 TAS2R19P59542 299 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ECH1Q13011 328 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 AIMP2Q13155 320 aaKnown RBP12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF684Q5T5D7 378 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 SIGIRRQ6IA17 410 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ADGRG3Q86Y34 549 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 IQCF2Q8IXL9 164 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 STEAP2Q8NFT2 490 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 CTHRC1Q96CG8 243 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 RAB3CQ96E17 227 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 OR8B4Q96RC9 309 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ATF6BQ99941 703 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 FAM173AQ9BQD7 235 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 KCNE5Q9UJ90 142 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 PCDHGA1Q9Y5H4 931 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 OR2M5A3KFT3 312 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 E9PI62 339 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 F5H0A9 414 aaPredicted RBP12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 DVL2O14641 736 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF780AO75290 641 aaPredicted RBP12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 SLC22A5O76082 557 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 POU3F3P20264 500 aaPredicted RBP12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 RIPPLY1Q0D2K3 151 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 DMRTC1Q5HYR2 192 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 FAM209AQ5JX71 171 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 WDR88Q6ZMY6 472 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 SIAH3Q8IW03 269 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 NKAIN3Q8N8D7 197 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 LIPHQ8WWY8 451 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 DERL3Q96Q80 235 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 METTL9Q9H1A3 318 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 OBP2BQ9NPH6 170 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ICAM5Q9UMF0 924 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 ETV7Q9Y603 341 aa12.75□□□□□ -0.37
SHROOM1-203ENST00000378679 LOC100289279A0A1B0GTE1 492 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 FITM1A5D6W6 292 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 IFITM5A6NNB3 132 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 B8ZZF3 427 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 RRP8O43159 456 aaKnown RBP12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 KLK10O43240 276 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 ZFPL1O95159 310 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 PRH1P02810 166 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 INHBBP09529 407 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 CSF3P09919 207 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 B4GALT1P15291 398 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 PSMB1P20618 241 aaKnown RBP12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 CRYBB2P43320 205 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 KIR2DL3P43628 341 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 SEC61A1P61619 476 aaKnown RBP12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 ISXQ2M1V0 245 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF658BQ4V348 819 aaPredicted RBP12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 GIMAP1Q8WWP7 306 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 ZC3H10Q96K80 434 aaKnown RBP12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 PRSS27Q9BQR3 290 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 C1QTNF6Q9BXI9 259 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 FAM86C1Q9NVL1 165 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 KCNS2Q9ULS6 477 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 SLC22A23A1A5C7 686 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 PLPP3O14495 311 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 EVX1P49640 407 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 RGS19P49795 217 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 HACD4Q5VWC8 232 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 Q6ZTK2 550 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 PGAP1Q75T13 922 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 MICU1Q9BPX6 476 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 MFRPQ9BY79 579 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 PIGLQ9Y2B2 252 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 CD34P28906 385 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 FGF9P31371 208 aaPredicted RBP12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 CRYBA2P53672 197 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 CDC20Q12834 499 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 CLN3Q13286 438 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 CEACAM16Q2WEN9 425 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 GLIPR1L1Q6UWM5 242 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 VASH2Q86V25 355 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 C17orf47Q8NEP4 570 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 OR56B1Q8NGI3 324 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 LRRC46Q96FV0 321 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 R4GMQ9 66 aa12.74□□□□□ -0.37
SHROOM1-203ENST00000378679 WDR87Q6ZQQ6 2873 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms