RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SNRPGP62308 76 aaKnown RBP11.4□□□□□ -0.58
CKAP2-202ENST00000378034 SNRPD2P62316 118 aaKnown RBP11.4□□□□□ -0.58
CKAP2-202ENST00000378034 GGTLC2Q14390 218 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 MST1LQ2TV78 715 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 SLC16A9Q7RTY1 509 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 DPY19L4Q7Z388 723 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 ZNF555Q8NEP9 628 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 OR1J1Q8NGS3 322 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 ST7LQ8TDW4 575 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 RFKQ969G6 155 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 SPTSSAQ969W0 71 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 TRMT61AQ96FX7 289 aaKnown RBP11.4□□□□□ -0.58
CKAP2-202ENST00000378034 GSX2Q9BZM3 304 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 YIPF3Q9GZM5 350 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 RNPEPL1Q9HAU8 725 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 FAM118AQ9NWS6 357 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 WARS2Q9UGM6 360 aaKnown RBP11.4□□□□□ -0.58
CKAP2-202ENST00000378034 AKAP6Q13023 2319 aa11.4□□□□□ -0.58
CKAP2-202ENST00000378034 LOC100130705A0A1B0GUX0 176 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 M0R129 80 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 MPZL2O60487 215 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF250P15622 560 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 RPS27P42677 84 aaKnown RBP11.39□□□□□ -0.59
CKAP2-202ENST00000378034 EIF2B1Q14232 305 aaKnown RBP11.39□□□□□ -0.59
CKAP2-202ENST00000378034 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 MEDAGQ5VYS4 303 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 TMEM154Q6P9G4 183 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF101Q8IZC7 436 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 GALNT4Q8N4A0 578 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 OTOSQ8NHW6 89 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 SLAMF6Q96DU3 332 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 CXXC4Q9H2H0 198 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 VCXQ9H320 206 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 GRIP1Q9Y3R0 1128 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF878C9JN71 531 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 H7C417 338 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 PSKH1P11801 424 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 HTR1FP30939 366 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 SLC15A1P46059 708 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 TPTEP56180 551 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 PPP1CBP62140 327 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 GRB2P62993 217 aaKnown RBP11.39□□□□□ -0.59
CKAP2-202ENST00000378034 MOGQ16653 247 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF718Q3SXZ3 478 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 OR10S1Q8NGN2 331 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 ABHD4Q8TB40 342 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 SYNPRQ8TBG9 265 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 APOBEC3DQ96AK3 386 aaPredicted RBP11.39□□□□□ -0.59
CKAP2-202ENST00000378034 MNTQ99583 582 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 DOK1Q99704 481 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 TMEM14AQ9Y6G1 99 aa11.39□□□□□ -0.59
CKAP2-202ENST00000378034 TMEM129A0AVI4 362 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 SNTNA6NMZ2 147 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 DLGAP1O14490 977 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 SELENOFO60613 162 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 LYNP07948 512 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 OTX1P32242 354 aaPredicted RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 PTH2RP49190 550 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 PPOXP50336 477 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 POU4F2Q12837 409 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 TAF13Q15543 124 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 OCLNQ16625 522 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 RSPO1Q2MKA7 263 aaPredicted RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 MBNL2Q5VZF2 373 aaKnown RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 TTC23Q5W5X9 447 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 RFPL4BQ6ZWI9 263 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 BCDIN3DQ7Z5W3 292 aaKnown RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 OR5L1Q8NGL2 311 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 RNF133Q8WVZ7 376 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 SLC7A6Q92536 515 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 MARS2Q96GW9 593 aaKnown RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 ZNF582Q96NG8 517 aaPredicted RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 CNN2Q99439 309 aaKnown RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 CACNG6Q9BXT2 260 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 MRPL37Q9BZE1 423 aaKnown RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 OR51B6Q9H340 312 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 NKX1-2Q9UD57 310 aaPredicted RBP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 GPR160Q9UJ42 338 aa11.38□□□□□ -0.59
CKAP2-202ENST00000378034 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.38□□□□□ -0.59
CKAP2-202ENST00000378034 IGLV3-9A0A075B6K5 115 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 NGFP01138 241 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 APOC1P02654 83 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 DBHP09172 617 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 ACSM4P0C7M7 580 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 GCH1P30793 250 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 NAA10P41227 235 aaPredicted RBP11.37□□□□□ -0.59
CKAP2-202ENST00000378034 ART1P52961 327 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 KLF3P57682 345 aaPredicted RBP11.37□□□□□ -0.59
CKAP2-202ENST00000378034 RIPK1Q13546 671 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 MSMPQ1L6U9 139 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 DRAM2Q6UX65 266 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 COLCA1Q6ZS62 124 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 KCNJ15Q99712 375 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 APOL4Q9BPW4 351 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 COPS4Q9BT78 406 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 C1QTNF5Q9BXJ0 243 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 CENPMQ9NSP4 180 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 SLCO1C1Q9NYB5 712 aa11.37□□□□□ -0.59
CKAP2-202ENST00000378034 LAMP5Q9UJQ1 280 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms