RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 CBR3O75828 277 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 DFFBO76075 338 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 SUMO3P55854 103 aaPredicted RBP16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 ZNF468Q5VIY5 522 aaPredicted RBP16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 LIMS2Q7Z4I7 341 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 OR52N5Q8NH56 324 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 ZPBPQ9BS86 351 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 SAMD10Q9BYL1 202 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 OCEL1Q9H607 264 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 PRDM7Q9NQW5 492 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 OR2W5A6NFC9 320 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 ASAH1Q13510 395 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 SLC17A1Q14916 467 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 KCNG2Q9UJ96 466 aa16.15■□□□□ 0.18
CNTNAP3-204ENST00000377656 ST8SIA3O43173 380 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 TGM6O95932 706 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 NME1P15531 152 aaKnown RBP16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 TGM4P49221 684 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 TPBGQ13641 420 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 SLC35G3Q8N808 338 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 KIAA1958Q8N8K9 716 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 HPSE2Q8WWQ2 592 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 BOLA1Q9Y3E2 137 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 IFITM5A6NNB3 132 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CT45A6P0DMU7 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CT45A5P0DMU8 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CT45A7P0DMV0 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CT45A8P0DMV1 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CT45A9P0DMV2 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 DGCR2P98153 550 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 AGERQ15109 404 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CT45A2Q5DJT8 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CT45A1Q5HYN5 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 RHOUQ7L0Q8 258 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 ZFP82Q8N141 532 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CT45A3Q8NHU0 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 RPH3ALQ9UNE2 315 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 A0A096LPE4 126 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 A0A1W2PPZ6 126 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 C5orf49A4QMS7 147 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 FIGNL2A6NMB9 653 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 DHHO43323 396 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 NRASP01111 189 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 HLA-BQ31612 363 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CADM3Q8N126 398 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 SLC38A9Q8NBW4 561 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CPEB3Q8NE35 698 aaKnown RBP16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 SPACA9Q96E40 222 aaPredicted RBP16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 SPACA5Q96QH8 159 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 EDEM2Q9BV94 578 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 JAM3Q9BX67 310 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 PROCRQ9UNN8 238 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 R4GMQ9 66 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 XRCC2O43543 280 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 PIAS2O75928 621 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 EPHA2P29317 976 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 BTN1A1Q13410 526 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 HES1Q14469 280 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 BHLHA9Q7RTU4 235 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 OR1S2Q8NGQ3 325 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 ARV1Q9H2C2 271 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 SLC22A13Q9Y226 551 aa16.14■□□□□ 0.17
CNTNAP3-204ENST00000377656 SPTA1P02549 2419 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 PRR35P0CG20 571 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 FABP5Q01469 135 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 HMGN3Q15651 99 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 SSX2Q16385 188 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 LAIR1Q6GTX8 287 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 CREB3L2Q70SY1 520 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 KANSL1Q7Z3B3 1105 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 SHARPINQ9H0F6 387 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 FGF20Q9NP95 211 aaPredicted RBP16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 CROCCQ5TZA2 2017 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 TIMD4Q96H15 378 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 TRIB1Q96RU8 372 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 TMEM43Q9BTV4 400 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 SERGEFQ9UGK8 458 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 TRAPPC2P0DI81 140 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 TRAPPC2BP0DI82 140 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 MYF5P13349 255 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 NKX2-1P43699 371 aaPredicted RBP16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 AGFG1P52594 562 aaKnown RBP16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 TP53I13Q8NBR0 393 aaPredicted RBP16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 OR13C5Q8NGS8 318 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 RDH5Q92781 318 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 RAB4AP20338 218 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 CCL7P80098 99 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 DMWDQ09019 674 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 FOXF1Q12946 379 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 LSRQ86X29 649 aaPredicted RBP16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 ZNF573Q86YE8 665 aa16.13■□□□□ 0.17
CNTNAP3-204ENST00000377656 SMLR1H3BR10 107 aa16.12■□□□□ 0.17
CNTNAP3-204ENST00000377656 SCAF4O95104 1147 aaKnown RBP16.12■□□□□ 0.17
CNTNAP3-204ENST00000377656 APOA2P02652 100 aa16.12■□□□□ 0.17
CNTNAP3-204ENST00000377656 FOLR1P15328 257 aa16.12■□□□□ 0.17
CNTNAP3-204ENST00000377656 GABRG1Q8N1C3 465 aa16.12■□□□□ 0.17
CNTNAP3-204ENST00000377656 PXT1Q8NFP0 134 aa16.12■□□□□ 0.17
CNTNAP3-204ENST00000377656 DYNC2LI1Q8TCX1 351 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms