RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 PELI1Q96FA3 418 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 BOD1Q96IK1 185 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 BRD7Q9NPI1 651 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 TRIM36Q9NQ86 728 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 B3GNT2Q9NY97 397 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 AMDHD2Q9Y303 409 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 GRIP1Q9Y3R0 1128 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 N6AMT1Q9Y5N5 214 aa11.29□□□□□ -0.6
CBWD3-203ENST00000377344 E9PI62 339 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 F5H5K5 113 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 SYNGR3O43761 229 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF254O75437 659 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 CCNOP22674 350 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 NR1H2P55055 460 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 DOC2BQ14184 412 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 XKRXQ6PP77 449 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 DEGS2Q6QHC5 323 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 RHOUQ7L0Q8 258 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF283Q8N7M2 679 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ZFP41Q8N8Y5 198 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 CPEB3Q8NE35 698 aaKnown RBP11.28□□□□□ -0.6
CBWD3-203ENST00000377344 SPTSSAQ969W0 71 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 MGLLQ99685 303 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 OBP2BQ9NPH6 170 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 DDX28Q9NUL7 540 aaKnown RBP11.28□□□□□ -0.6
CBWD3-203ENST00000377344 NCOA6Q14686 2063 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-203ENST00000377344 CACNA1CQ13936 2221 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ABHD16AO95870 558 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 LALBAP00709 142 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 TFAP2AP05549 437 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 DBHP09172 617 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 CCL2P13500 99 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 STOMP27105 288 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 CCKARP32238 428 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 SLC6A9P48067 706 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 IDH3GP51553 393 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ECH1Q13011 328 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 PPA1Q15181 289 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 TAB1Q15750 504 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ARMCX4Q5H9R4 360 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 P2RY8Q86VZ1 359 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF485Q8NCK3 441 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ITLN2Q8WWU7 325 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-203ENST00000377344 RNASE6Q93091 150 aaKnown RBP11.28□□□□□ -0.6
CBWD3-203ENST00000377344 MUL1Q969V5 352 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ZC3HAV1LQ96H79 300 aaKnown RBP11.28□□□□□ -0.6
CBWD3-203ENST00000377344 MS4A3Q96HJ5 214 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 COG8Q96MW5 612 aa11.28□□□□□ -0.6
CBWD3-203ENST00000377344 ZNF462Q96JM2 2506 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 TMEM269A0A1B0GVZ9 245 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 C5orf49A4QMS7 147 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 OR6C6A6NF89 314 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 CLDN14O95500 239 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 GRNP28799 593 aaKnown RBP11.27□□□□□ -0.61
CBWD3-203ENST00000377344 APLNRP35414 380 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 RPL5P46777 297 aaKnown RBP11.27□□□□□ -0.61
CBWD3-203ENST00000377344 CX3CR1P49238 355 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 SNTB1Q13884 538 aaKnown RBP11.27□□□□□ -0.61
CBWD3-203ENST00000377344 TSTQ16762 297 aaKnown RBP11.27□□□□□ -0.61
CBWD3-203ENST00000377344 ZNF829Q3KNS6 432 aaPredicted RBP11.27□□□□□ -0.61
CBWD3-203ENST00000377344 FBXL19-AS1Q494R0 122 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
CBWD3-203ENST00000377344 HSD17B8Q92506 261 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 KCNJ15Q99712 375 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 COQ7Q99807 217 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 NIPAL2Q9H841 368 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 SLC25A15Q9Y619 301 aa11.27□□□□□ -0.61
CBWD3-203ENST00000377344 CHD6Q8TD26 2715 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 FAM208BQ5VWN6 2430 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 M0R135 149 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 SERPINA5P05154 406 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 ANXA2P07355 339 aaKnown RBP11.26□□□□□ -0.61
CBWD3-203ENST00000377344 CELA3BP08861 270 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 SLC2A1P11166 492 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 CBR1P16152 277 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 JUNBP17275 347 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-203ENST00000377344 CELP19835 753 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 AGAP20933 346 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 GDI2P50395 445 aaKnown RBP11.26□□□□□ -0.61
CBWD3-203ENST00000377344 ZNF83P51522 516 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 GP2P55259 537 aaKnown RBP11.26□□□□□ -0.61
CBWD3-203ENST00000377344 TPTEP56180 551 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 TAS2R43P59537 309 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 MFGE8Q08431 387 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-203ENST00000377344 MLLT11Q13015 90 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-203ENST00000377344 ODF4Q2M2E3 257 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 LIPKQ5VXJ0 399 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 ZNF584Q8IVC4 421 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 SLC30A7Q8NEW0 376 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 ZNF799Q96GE5 643 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 OPALINQ96PE5 141 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 USB1Q9BQ65 265 aaKnown RBP11.26□□□□□ -0.61
CBWD3-203ENST00000377344 MED18Q9BUE0 208 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 R4GMQ9 66 aa11.26□□□□□ -0.61
CBWD3-203ENST00000377344 DIDO1Q9BTC0 2240 aaKnown RBP11.26□□□□□ -0.61
CBWD3-203ENST00000377344 LOC100509620A0A075B734 347 aa11.25□□□□□ -0.61
CBWD3-203ENST00000377344 TRBV2A0A0J9YWF9 115 aa11.25□□□□□ -0.61
CBWD3-203ENST00000377344 LOC110117498-PIK3R3F6TDL0 507 aa11.25□□□□□ -0.61
CBWD3-203ENST00000377344 PNPP00491 289 aa11.25□□□□□ -0.61
CBWD3-203ENST00000377344 ZNF14P17017 642 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms