RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 OIT3Q8WWZ8 545 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 SLC35B4Q969S0 331 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 SMIM3Q9BZL3 60 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 GDF2Q9UK05 429 aaPredicted RBP16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 PCOLCE2Q9UKZ9 415 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 RRAS2P62070 204 aaPredicted RBP16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 NKG7Q16617 165 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 WFDC8Q8IUA0 241 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 FAM109AQ8N4B1 249 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 OR10G3Q8NGC4 313 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 METTL17Q9H7H0 456 aaPredicted RBP16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 UCK1Q9HA47 277 aa16.18■□□□□ 0.18
CLSTN1-202ENST00000377298 K7EPK0 472 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PRKACAP17612 351 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 C21orf58P58505 322 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 TOMM34Q15785 309 aaPredicted RBP16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 ELFN2Q5R3F8 820 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 HES3Q5TGS1 186 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PWWP2BQ6NUJ5 590 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 GFRALQ6UXV0 394 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 FAM71E2Q8N5Q1 922 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 KTI12Q96EK9 354 aaPredicted RBP16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 LRRC3BQ96PB8 259 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PBOV1Q9GZY1 135 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 MMP25Q9NPA2 562 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 IL20Q9NYY1 176 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 CHST2Q9Y4C5 530 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 BTBD17A6NE02 478 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 GABARAPH6UMI1 98 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 M0QYG6 137 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 MED6O75586 246 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 CD79BP40259 229 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PPP1CAP62136 330 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 WIPI1Q5MNZ9 446 aaPredicted RBP16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 SFRP5Q5T4F7 317 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 CNTNAP3BQ96NU0 1288 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 SIRT5Q9NXA8 310 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PLXNB2O15031 1838 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A0D9SG52 128 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 GPX5O75715 221 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PMP2P02689 132 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 SORDQ00796 357 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 ZNF718Q3SXZ3 478 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PDLIM3Q53GG5 364 aaPredicted RBP16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 SLC22A25Q6T423 547 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 RFPL4BQ6ZWI9 263 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 SPRED2Q7Z698 418 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 OR4A16Q8NH70 328 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 SMOC1Q9H4F8 434 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 EXO1Q9UQ84 846 aaKnown RBP16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 COLQQ9Y215 455 aaPredicted RBP16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 WNK3Q9BYP7 1800 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A1W2PQF6 199 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 HOXB3P14651 431 aaPredicted RBP16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PCK2Q16822 640 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 LSRQ86X29 649 aaPredicted RBP16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 GCM1Q9NP62 436 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 PLA2G3Q9NZ20 509 aa16.17■□□□□ 0.18
CLSTN1-202ENST00000377298 B4GALT1P15291 398 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 OGFOD3Q6PK18 319 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 GPR119Q8TDV5 335 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 C3orf49Q96BT1 292 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 SDSLQ96GA7 329 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 REEP6Q96HR9 211 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 AIPO00170 330 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 GLAP06280 429 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 RPS27P42677 84 aaKnown RBP16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 RNLSQ5VYX0 342 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 TFAP2EQ6VUC0 442 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 SCCPDHQ8NBX0 429 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 OR4D6Q8NGJ1 314 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 FCRL1Q96LA6 429 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 C11orf54Q9H0W9 315 aaPredicted RBP16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 PMS2P2O95744 297 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 TPBGQ13641 420 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 CEACAM16Q2WEN9 425 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 DVL3Q92997 716 aaPredicted RBP16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 KISS1RQ969F8 398 aaPredicted RBP16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 DNAJB12Q9NXW2 375 aaKnown RBP16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 M0R1B8 84 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 OR5H6Q8NGV6 325 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 ERVMER34-1Q9H9K5 563 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 ZFP64Q9NPA5 681 aa16.16■□□□□ 0.18
CLSTN1-202ENST00000377298 A0A1W2PS29 197 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 SH2D1BO14796 132 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 EMP3P54852 163 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 MDGA2Q7Z553 956 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 PRSS42Q7Z5A4 293 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 C1orf87Q8N0U7 546 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 BORCS7Q96B45 105 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 NTN4Q9HB63 628 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 LHX9Q9NQ69 397 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 PHF1O43189 567 aaPredicted RBP16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 NDUFB7P17568 137 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 RPS27AP62979 156 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 UBA52P62987 128 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 HES1Q14469 280 aa16.15■□□□□ 0.18
CLSTN1-202ENST00000377298 SOWAHCQ53LP3 525 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms